Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium667g00002 TGGAAACTACAGAGACTACAAGACAAGATCAAATTGGTTCCTATTGATCTTCAAGATAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCATTGGAGCACAATGGCAAGGTTTTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCCAACTTTGAAGGGACACCTTTGTTTCCTGGTGATCCTGCTAAGAAAGAGTTTGGTGAACAACTATTATCCCATGTTGATACATTCAACAATGACGCGTCCTCTTCATTGAAAGGGGGTGTTGTACAGCAAGCTAGTTCTGCCTTTGATTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCGTTCTTTCTTGGTCAATTCAGTTTGGTGGATATTGCATACATTCCATTTGTTGAAAGATTCCAACCTGTCTCTGTTGACGTGTTCAAACATGACATCACCGAAGGAAGGCCAAAACTTGCAACGTGGATTGAGGAGGTTAACAAGATTGATGCTTATACAGAGACAAAATTAGAACCCCAGGAAATCGTTGATAGATTCAAGAAACGTTATCTGTCTCAACAGTGA 579 0.4041 WKLQRLQDKIKLVPIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPGDPAKKEFGEQLLSHVDTFNNDASSSLKGGVVQQASSAFDYLENALGKFDDGPFFLGQFSLVDIAYIPFVERFQPVSVDVFKHDITEGRPKLATWIEEVNKIDAYTETKLEPQEIVDRFKKRYLSQQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium667g00002 192 Pfam Glutathione S-transferase, C-terminal domain 96 162 - -
Vium667g00002 192 SUPERFAMILY Thioredoxin-like 4 83 IPR036249 -
Vium667g00002 192 Gene3D - 60 192 - -
Vium667g00002 192 CDD GST_C_Lambda 67 185 - -
Vium667g00002 192 Gene3D Glutaredoxin 1 59 - -
Vium667g00002 192 SUPERFAMILY GST C-terminal domain-like 58 187 IPR036282 -
Vium667g00002 192 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 62 IPR004045 -
Vium667g00002 192 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 188 IPR044629 GO:0004364
Vium667g00002 192 FunFam Lambda class glutathione S-transferase 60 191 - -
Vium667g00002 192 Pfam Glutathione S-transferase, N-terminal domain 8 61 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium667g00002 Vium-Chr667 15444 17117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium667g00002 6 189 Glutathione S-transferase Gene Family AT5G02790 65.761 3.95e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium667g00002 K00799 - gmx:547597 329.331