Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6658g00002 ATGGCCACCCTCTCCAATCGCCGCCGCACGCTCCCGCAGGATGACACTGACGCCCAGGTGATAACTGCAGACTCCGTTTCCACCAACTACCGCACGATGCCCTGCCTTGTCACCGGAAAAACCGTGCTCCAGCCTCACCTAGCTCGGCAAGAATCTTTACGCCGAAACATTGGCCACGTCGCTGCAGAAACCTACTTGATTACTCGCCTCGCCATCACGCTTCTTCGCTACCTCGGGATTGGTTACCGTTGGATTACACAATTACTTGCTCTTGGATGTTATGCCTTGCTACTCATGCCCGGTTTTTTGCAAGTTGCATATTACTATTTCTCCTCACCCAAGGTAAAGCGAAGCCTTGTTTATGGAGATCAGCCTAGAAACAGGTTCGATCTGTATCTACCATCTGATATTGGTAAACCTAACCCAGTTTTGATATTTGTAACTGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGTTCCCTTTTAGGACTACAGTTGGCAGAACGAGGCATTATAGTGGCATGCTTAGATTACAGAAATTTTCCTCAAGGGACTATCAGTGACATGATAAATGATACTTGTCAGGGAATTTCCTTTATCATCAACAACATAGCTAAATATGGAGGTGACCCTAATAGAGTTTATCTAATGGGACAATCTGCCGGTGCTCATATTTCCTCTTGCGCTTTACTGGAGCAAGCAGCCAGAGAATCAAATAAAGGAGAGAATGTTTCTTGGAGCATTTCGCAGATCAAAGCTTATTTTGGTTTATCTGGAGGGTAA 786 0.4593 MATLSNRRRTLPQDDTDAQVITADSVSTNYRTMPCLVTGKTVLQPHLARQESLRRNIGHVAAETYLITRLAITLLRYLGIGYRWITQLLALGCYALLLMPGFLQVAYYYFSSPKVKRSLVYGDQPRNRFDLYLPSDIGKPNPVLIFVTGGAWIIGYKAWGSLLGLQLAERGIIVACLDYRNFPQGTISDMINDTCQGISFIINNIAKYGGDPNRVYLMGQSAGAHISSCALLEQAARESNKGENVSWSISQIKAYFGLSGG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6658g00002 261 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 99 260 - -
Vium6658g00002 261 SUPERFAMILY alpha/beta-Hydrolases 112 238 IPR029058 -
Vium6658g00002 261 Gene3D alpha/beta hydrolase 107 261 IPR029058 -
Vium6658g00002 261 Pfam BD-FAE 130 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6658g00002 Vium-Chr6658 12935 18168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6658g00002 2 261 Carbohydrate Esterase AT5G15860 65.399 5.62e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6658g00002 K15889 - gmx:100788814 421.394