Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6658g00001 ATGATAAATGATACTTGTCAGGGAATTTCCTTTATCATCAACAACATAGCTAAATATGGAGGTGACCCTAATAGAGTTTATCTAATGGGACAATCTGCCGGTGCTCATATTTCCTCTTGCGCTTTACTGGAGCAAGCAGCCAGAGAATCAAATAAAGGAGAGAATGTTTCTTGGAGCATTTCGCAGATCAAAGCTTATTTTGGTTTATCTGGAGGATACAACTTATTAGATTTAGTGGATCACTTCGACAATCGTGGCTTGTATCGTCGGATCTTTTTGAGCATAATGGAAGGTGAAGAGTCTTTGAAGGTATATTCACCTGAAATTAAAATTCAAGATCCATGTCTCAAAAGTGCCATTCCTCACTTCCCACCAGTATATCTGGTCCATGGAACTGCAGATTATTCCATACCATCAGTAGCTAGTGAACGGTTTGCTGATGCTCTAAAGAAGGCAGGGGCAAGAGCTGAGTTGATTTTGTGTGAGGGGAAGAGTCATACAGATCTGTTTCTACAGGTAAGTTAA 525 0.4 MINDTCQGISFIINNIAKYGGDPNRVYLMGQSAGAHISSCALLEQAARESNKGENVSWSISQIKAYFGLSGGYNLLDLVDHFDNRGLYRRIFLSIMEGEESLKVYSPEIKIQDPCLKSAIPHFPPVYLVHGTADYSIPSVASERFADALKKAGARAELILCEGKSHTDLFLQVS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6658g00001 174 SUPERFAMILY alpha/beta-Hydrolases 2 173 IPR029058 -
Vium6658g00001 174 Pfam BD-FAE 2 149 - -
Vium6658g00001 174 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 3 168 - -
Vium6658g00001 174 Gene3D alpha/beta hydrolase 1 174 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6658g00001 Vium-Chr6658 1969 8581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6658g00001 1 174 Carbohydrate Esterase AT3G02410 66.092 2.92e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6658g00001 K15889 - vum:124843777 352.058