Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6640g00010 ATGGAAACTTTCACGGCTCTATTGTTTTTAACGGCGATCACAGCTTACTTGATATGGTTCACTTTCATCTCACGGTCGCTGAAGGGTCCACGTGTCTGGGCCTTATTGGGCAGTCTCCCGGGTCTCATAGACAACTGTGACCGCTTGCATGACTGGATCTGCGACAACCTACGCGCGTGTGGCGGCACTTACCAGACTTGCATCTGCGCAATCCCTTTCCTCGCCAAGAAGCAAGGTCTCGTGACTGTGACATGCGACCCGAGGAACCTGGAGCACATACTGAAGACCCGTTTCGACAATTACCCCAAAGGCCCCACGTGGCATGCTGTCTTTCATGATCTTTTGGGTGATGGGATCTTTAACTCTGACGGTGACACGTGGCTGTTCCAGCGCAAGACTGCAGCACTGGAATTCACCACCAGGACATTGCGTCAAGCCATGGCTAGATGGGTGAGCGGAGCCATCAGCCGCCTCTGCTTGATCCTGAAGAAAGCTCATGATCGAGCTGAACCCATTGATCTGCAAGACCTGATGCTTCGTCTTACTTTTGACAACATTTGTGGGTTAGCTTTTGGACGAGACCCACAAACATGTGTGTCGGGTTTGCCTGATAACCGTTTTGCAACTGCTTTTGACAGAGCCACCGAAGCCTCACTTCAGAGGTTCATTTTGCCAGAGGTGTTGTGGAAAGTGAAGAAATGGCTGCGGCTTGGAATGGAGGTGAGCCTGAGCCGAAGCCTTGTCCACGTGGACGACCATTTGTCGAATGTCATTGAGAAACGCAAGGTGGAATTGCTGAATCACCAGAAAGATGGGAGTCTTCATGATGACTTGCTGACTAGGTTTATGAGGAAGAAAGAATCATATACAGACAAGTTTCTACAACAGGTGGCACTGAATTTTATCCTAGCTGGACGCGACACGTCATCGGTGGCTCTGTGCTGGTTTTTCTGGTTGGTGATGCAGAATCCCAAAGTGGAGGAGAAAATTCTGCGTGAAATTTGTACAGTCTTGATGGAGACACGTGGCGATGACATGGCAAAATGGTTGGATGAGCCGTTGGCCTTTGAGGAAGTTGACCGTTTGATTTATCTCAAGGCAGCATTGTCTGAGACACTGAGGTTGTACCCTTCTGTGCCGGAGGACTCAAAGCATGTGGTGGCCGATGACGTGCTGCCGGACGGCACGTTTGTGCCGGCGGGGTCGTCGGTGACGTATTCCATTTATTCAGCGGGGAGGATGAAGTCCACGTGGGGTGAGGATTGCATGGAGTTTAGACCTGAGAGGTGGTTGTCATCGGATGGGACAAAGTTCATCACGCATGACTCTTTCAAGTTTGTTGCTTTCAATGCTGGTCCAAGAATATGTTTGGGGAAGGATTTGGCTTACCTTCAGATGAAGTCCATTGCTGCCGCGGTGCTGCTCCGGCACCGCCTTGTGCTGGTGCCTGGCCACCTGGTGGAGCAAAAGATATCACTCACTTTGTTCATGAAAAATGGACTCAAGGTCAATGTCCATGAGAGGGACTTGAGAGGGGTCATTATAAGTATACAAAAAGAAAAGGAGGGAGATGCGGGTTTTAGAAGTAATGAATGTTAG 1599 0.4997 METFTALLFLTAITAYLIWFTFISRSLKGPRVWALLGSLPGLIDNCDRLHDWICDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSGAISRLCLILKKAHDRAEPIDLQDLMLRLTFDNICGLAFGRDPQTCVSGLPDNRFATAFDRATEASLQRFILPEVLWKVKKWLRLGMEVSLSRSLVHVDDHLSNVIEKRKVELLNHQKDGSLHDDLLTRFMRKKESYTDKFLQQVALNFILAGRDTSSVALCWFFWLVMQNPKVEEKILREICTVLMETRGDDMAKWLDEPLAFEEVDRLIYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRMKSTWGEDCMEFRPERWLSSDGTKFITHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLVLVPGHLVEQKISLTLFMKNGLKVNVHERDLRGVIISIQKEKEGDAGFRSNEC 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6640g00010 532 Pfam Cytochrome P450 81 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 CDD CYP86A 67 501 - -
Vium6640g00010 532 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 PANTHER CYTOCHROME P450 19 503 - -
Vium6640g00010 532 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6640g00010 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vium6640g00010 532 FunFam Cytochrome P450 21 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6640g00010 Vium-Chr6640 190799 193553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6640g00010 1 523 Cytochrome P450 AT2G45970 77.524 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6640g00010 K15398 - gmx:100779986 1008.44