Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6634g00001 ATGGGAACCTCTGCAAACGCCGCTCCCGGTGGTCGAGGCGCCCCTGTTCCCAAAGACGTTGACTTCGCCAATTACTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGATATGCTCTCGGATCGTGTTCGCATGGACGCTTACTTCAACGCCATCTTTGAGAACAAAAACCACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCAGCGCAAGCGGGTGCGAGGAAGGTGTATGCAGTGGAAGCGACGAAGATGTCAGAACATGCCCGTGCACTAGTCAAAGCGAATAATCTCCAGAATGTAGTTGAGGTCATCGAGGGATCAATGGAGGATGTTACCTTGCCTGAGAAAGTTGACGTGATCATCTCTGAGTGGATGGGTTATTTTCTTCTGCGAGAATCCATGTTTGATTCAGTTATACATGCTCGTGACCACTGGCTCAAACCGACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATCAGGACTGGGATAGTTGATCACAAATCAGGAGAATATGAATCAACTATGGATGATTGGAACAACTTCGTTGATGAAACAAAAACCTATTATGGTGTTGATATGAGCACTTTAACAAAGCCTTTTTCAGATGAGCAAAGAAAATACTATCTTCAGACATCTTTGTGGAACAACCTTCATCCACATCAAGTCATTGGAACTGCTGCCATAATAAAGGAAATTGATTGTTTAACTGCCACAGTGGCTGACATAGAAAAAGTTAGATCAAACTTTTCTTTGTCAATAACCATGGAAAACGCAAAGTTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTTTGGGGAAGAAGTGAGGATCCAGCTAAACAGGAGATTGAGTTAACTACAGCTCCTAGTGTGGATTACGGTACACATTGGGGCCAACAGGTTTTTCTTTTGCATCCTCCTATGAATCTCAGTGAAGGTGATGATTTAAAGGTTTCTTTTCTGATGAGTCGCTCAAAGGCGAATCATCGTTTGATGGAGGTTGAACTTGGATGTGAGATTCATCAGCATTCCGGCAAGCTACTTGCACCTTTCAAAAATAAGTACTACATTGAGTAA 1122 0.4403 MGTSANAAPGGRGAPVPKDVDFANYFCTYAFLYHQKDMLSDRVRMDAYFNAIFENKNHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQNVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVIHARDHWLKPTGVMYPSHARMWMAPIRTGIVDHKSGEYESTMDDWNNFVDETKTYYGVDMSTLTKPFSDEQRKYYLQTSLWNNLHPHQVIGTAAIIKEIDCLTATVADIEKVRSNFSLSITMENAKLCGFGGWFDVHFWGRSEDPAKQEIELTTAPSVDYGTHWGQQVFLLHPPMNLSEGDDLKVSFLMSRSKANHRLMEVELGCEIHQHSGKLLAPFKNKYYIE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6634g00001 373 FunFam Protein arginine N-methyltransferase PRMT10 166 373 - -
Vium6634g00001 373 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Vium6634g00001 373 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Vium6634g00001 373 CDD AdoMet_MTases 63 163 - -
Vium6634g00001 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 356 IPR025799 GO:0016274|GO:0018216
Vium6634g00001 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Vium6634g00001 373 Gene3D - 166 373 - -
Vium6634g00001 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Vium6634g00001 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6634g00001 Vium-Chr6634 1290 5265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6634g00001 24 326 C2H2 Transcription Factor Family AT3G12270 31.481 2.47e-41 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6634g00001 K11434 - gmx:100795134 716.842