Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium6533g00021 | ATGAATCCTCTTGGAAAGTTTCCTGTGTTGGAAACACCCGATGGTCCAGTCTTCGAAAGCAATGCCATTGCTCGTTACGTTGCTCGGCTCAATGGTGACAACGCATTGTACCTGTCTACTCCCATTGATAATGCCCGCATCGACCAGTGGATTGATTTTTCAACTTTGGAGATTGATTCTAATATTCTCAAATTGTACCTACCAAGGTTTGGATACGCTCCATACCTTCCACCGGCGGTGGAGGCTGCAAATTCTGCGTTGAAGAGAGCATTGGGGGCCTTGAACACTCACCTTGCATCCAATACGTACCTGGTTGGTGATTCCGTCACCCTTGCTGACATCATAACGACATGCAACCTGTATTTGGGTTTCACCGAGATCTTAGTTAAGAGCTTCACTTCGGAGTTCCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAGCCCAATTTCCGCAAGATATTAGGTCAGGTTAAGCAAACCGACGTTGTTCCACCTCTTCAATCTGCGAAGAAGCCTGCCCAGCCTAAGGAGTCGAAACCCAAACCTAAGGATGAGCCGAAGAAAGTGGCTAAGCCAGAGCCAGAGAAGCCCAAAGAAGAGGCAGAAGAGGAGGCACCCAAGCCCAAGCCCAAAAATCCCCTTGATCTTCTTCCTCCAAGCAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAGACCAACTTCCGCGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCAGAGGGTTATTCTCTCTGGTTCTGTGATTACAAATACAACGACGAGAACACTGTTTCCTTTGTGACATTAAACAAGGTTGGTGGTTTTCTTCAGCGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGCTTGTAATTGGATCACAGGCACCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGCGGGCAAGAGATTCCACAATTTGTGATTGACGAGTGTTATGATATGGAGCTGTACGAGTGGACCAAGGTTGACATCTCTGACGAAACTCAGAAAGAGCGGGTGAATCAGATGATTGAGGATTATGAACCATTTGAGGGAGAGCCTCTTCTGGATGCTAAGTGCTTCAAGTGA | 1119 | 0.4656 | MNPLGKFPVLETPDGPVFESNAIARYVARLNGDNALYLSTPIDNARIDQWIDFSTLEIDSNILKLYLPRFGYAPYLPPAVEAANSALKRALGALNTHLASNTYLVGDSVTLADIITTCNLYLGFTEILVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTDVVPPLQSAKKPAQPKESKPKPKDEPKKVAKPEPEKPKEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSQAPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDETQKERVNQMIEDYEPFEGEPLLDAKCFK | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium6533g00021 | 372 | FunFam | Elongation factor 1 gamma | 33 | 169 | - | - | |
Vium6533g00021 | 372 | FunFam | Elongation factor 1-gamma 1 | 212 | 372 | - | - | |
Vium6533g00021 | 372 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 212 | 372 | IPR036433 | GO:0003746|GO:0006414 | |
Vium6533g00021 | 372 | MobiDBLite | consensus disorder prediction | 166 | 219 | - | - | |
Vium6533g00021 | 372 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 212 | 372 | IPR001662 | GO:0003746|GO:0006414 | |
Vium6533g00021 | 372 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 40 | 168 | IPR010987 | - | |
Vium6533g00021 | 372 | Pfam | Glutathione S-transferase, C-terminal domain | 79 | 150 | IPR004046 | - | |
Vium6533g00021 | 372 | Gene3D | Glutaredoxin | 1 | 30 | - | - | |
Vium6533g00021 | 372 | Gene3D | - | 33 | 166 | - | - | |
Vium6533g00021 | 372 | MobiDBLite | consensus disorder prediction | 176 | 212 | - | - | |
Vium6533g00021 | 372 | Pfam | Glutathione S-transferase, N-terminal domain | 1 | 29 | IPR004045 | - | |
Vium6533g00021 | 372 | SUPERFAMILY | eEF1-gamma domain | 212 | 372 | IPR036433 | GO:0003746|GO:0006414 | |
Vium6533g00021 | 372 | SUPERFAMILY | GST C-terminal domain-like | 26 | 164 | IPR036282 | - | |
Vium6533g00021 | 372 | SMART | EF1G_2 | 211 | 319 | IPR001662 | GO:0003746|GO:0006414 | |
Vium6533g00021 | 372 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 372 | IPR044628 | GO:0004364 | |
Vium6533g00021 | 372 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 35 | IPR004045 | - | |
Vium6533g00021 | 372 | Pfam | Elongation factor 1 gamma, conserved domain | 211 | 319 | IPR001662 | GO:0003746|GO:0006414 | |
Vium6533g00021 | 372 | SFLD | Glutathione Transferase (cytosolic) | 2 | 143 | IPR040079 | - | |
Vium6533g00021 | 372 | SUPERFAMILY | Thioredoxin-like | 1 | 41 | IPR036249 | - | |
Vium6533g00021 | 372 | CDD | GST_C_EF1Bgamma_like | 43 | 165 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium6533g00021 | Vium-Chr6533 | 66196 | 68470 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium6533g00021 | 1 | 372 | Eukaryotic Initiation Factors Gene Family | AT1G57720 | 76.075 | 0.0 | 559 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium6533g00021 | K03233 | - | gmx:100795680 | 624.009 |