Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium652g00004 ATGGGTGAGTTTGGCGTTCCCCACATGAGAAAAAGAAGTAGCAGCGACAACAGTGGTGGTAGCTTTGTTGGGTTGGATGTGAGAGTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACTCTCAGTGGATGGTGGTTTCAATCTGAGGTTGGCTAGTGGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGTGAGCGCCATATGCACAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCGCCACTCCCACTAGCATCAATAACAATAACCACCAAATCAAGAGGCCTCGCCATGAGTGCAATCCTTTTCCTTCCATACCTGATGTAACCGTGGCCATTTCTAACCCCACATCTAGAAAACATGGACCTTCACCCCATTTTCTTGGCTCTTCCACCACACTGCCGTACCTTGAATGCCCCCTTTCTCTTGCTAACTTTGGTTACAAAGCTGCAAATTTGGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGACTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCCGACTCAGAATGGCAGTCTCTGATGCATCACAAAGTTGGACTGAGCAGTGAGAGTTCTTGTAACAATCCCCAGCCTCAGTACTTGAATTCATTTACAGTATACAACACTGGACTGGATCAACAGAACAGACGCCACCCTTTGTTCCTGAATCCTCTGGTTGTTCCTATGGAAAATCTCCAACCAGAGAAGCCAAGAGGTTTCATTGATGCTTGGTCCAACACAGAAAGTGGTGAAAACAATGCCCCCACCAACAGCAAGAACTCTGCTGCATCAATCGGTAAATTGACCCTTTCTTCTCTTGATCTATCAATGGGGGGTGGTGCCGTGAACGAAGATGTAGGTAATGTTAACATAGGGCTGGGCCTAATGGAGTCTATTGCAAACACACACACCGATACCAAAATCTCTCTGTCGAACTGGGTCAACCCTGCACCTTGGGTGGGTTCAACGCTTGGGGGTCCTCTGGCTGAAGTTCTAAGGTCAAGCACAGTGACTGCGACAACGAACGAAAGAACCTCAAACACACCCTCACCAGCCACCACACATGTGGAAAGTAACAGTCCTCTGGGAACAATGGTGTCGTCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGGGCGAATTCTGAGATGGCCCTGCTGAGGTTTCAACGAAATGTAAATTAA 1584 0.4773 MGEFGVPHMRKRSSSDNSGGSFVGLDVRVQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKLSVDGGFNLRLASGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTATPTSINNNNHQIKRPRHECNPFPSIPDVTVAISNPTSRKHGPSPHFLGSSTTLPYLECPLSLANFGYKAANLDSMASVSANKEPRGLDWMLNGDPISLGASDSEWQSLMHHKVGLSSESSCNNPQPQYLNSFTVYNTGLDQQNRRHPLFLNPLVVPMENLQPEKPRGFIDAWSNTESGENNAPTNSKNSAASIGKLTLSSLDLSMGGGAVNEDVGNVNIGLGLMESIANTHTDTKISLSNWVNPAPWVGSTLGGPLAEVLRSSTVTATTNERTSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPRVASSRANSEMALLRFQRNVN 527
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium652g00004 527 MobiDBLite consensus disorder prediction 453 485 - -
Vium652g00004 527 MobiDBLite consensus disorder prediction 1 22 - -
Vium652g00004 527 MobiDBLite consensus disorder prediction 172 203 - -
Vium652g00004 527 Pfam WRC 141 183 IPR014977 -
Vium652g00004 527 ProSiteProfiles WRC domain profile. 140 184 IPR014977 -
Vium652g00004 527 PANTHER GROWTH-REGULATING FACTOR 5 97 380 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vium652g00004 527 MobiDBLite consensus disorder prediction 183 199 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium652g00004 Vium-Chr652 4262 7282 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium652g00004 137 195 GRF Transcription Factor Family AT2G36400 74.576 6.35e-23 99.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium652g00004 - - gmx:100796948 759.985