Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6472g00003 ATGAATCAATGGTTGAGAAAAAAAGTAAGTNAAGGTGCAGGGGATGATTCAGCAGCAGAAAGTGAATATGTAAGTGGTTTCTGCATAGAAAGAAAGATTGATTTAACAAGTCACATCAAATGGTGGGGATCTAATAAGACTCGACATTCTGACTCTGGGACAAGATTATCATCGGAAGAAAAAAAGCTTGGTTCTGCTGGAGATATTTGCAGTGAGCTAAAGCAATTGGAACAGAAAGTTCAACCTACAGAACCTTATCAGATGCCACAGTTAGGAAGGCCACACAATGAGAAAAAGCAAAGAAGTTCTTCAGTCTCTGCCTTAAGGATTCTTTCTCAATCTGCTGCTTACAAGAGCTTGCAGGAGAAAGCGTCAAAGAGACAGGAAAATAGTATTGATAACGATGAGAATGAAAACAAAAATACAGTCAACAAATTGGATCATGGAAAGGCAGTTGAGAAACCATCAAATCATGATGGAGGCAGTGATCGGCTTGACATTGCAATGGGAATGAGTGGGACAATGCCTCTTCAAAGAAATATCTACCCTTTGACGCCATTCTTGTCAGCACCACTTTTGACAGCTTACAATACTGTTGATCCAATGGTAGATCCTGTTCTCTGGACATCTCTTGTTCCCGTACTTCCTGCCGGCCTTTCTCGTACAGATGAGGTTACCAAGACAGAGACCAGTTCAACGTACACAATGTTTCAGCCAGAGGAATGA 726 0.4105 MNQWLRKKVSXGAGDDSAAESEYVSGFCIERKIDLTSHIKWWGSNKTRHSDSGTRLSSEEKKLGSAGDICSELKQLEQKVQPTEPYQMPQLGRPHNEKKQRSSSVSALRILSQSAAYKSLQEKASKRQENSIDNDENENKNTVNKLDHGKAVEKPSNHDGGSDRLDIAMGMSGTMPLQRNIYPLTPFLSAPLLTAYNTVDPMVDPVLWTSLVPVLPAGLSRTDEVTKTETSSTYTMFQPEE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6472g00003 241 Coils Coil 125 145 - -
Vium6472g00003 241 MobiDBLite consensus disorder prediction 122 161 - -
Vium6472g00003 241 MobiDBLite consensus disorder prediction 77 105 - -
Vium6472g00003 241 MobiDBLite consensus disorder prediction 119 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6472g00003 Vium-Chr6472 18915 20672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6472g00003 9 225 AP2-EREBP Transcription Factor Family AT2G41710 46.875 5.70e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6472g00003 K09285 - gmx:100786651 419.083