LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium646g00037	ATGATCATGGGAAACCTTAAACCTGCATGGTTGGAAGCTCTCTATGCACAAAAGTTCTTTGTGGGATGCTCATATCATGAGAATGCAAAGAAGAATGAGAAGAATATTTGCTGCTTAGATTGTTGCACCAGCATTTGTCCCCACTGCTTACCCTCCCATCGCTTCCATAGGCTTCTGCAGGTTCGCCGTTATGTATATCATGATGTTGTCAGATTGGAAGATCTTCACAAACTCATAGATTGCTCCAACGTCCAGCCTTATACCATCAACAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCACAAAACCGGCAATTCAAGGGGTCGGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTTATCCATTGCTCTCTGGGATGCAAGGTGGATTTTGTGTTGAAACACTACAAGGACCTCTCTTCCTATTTGAGAACATGCAAGTCACTGCAACTAAACTCTGATTTTCTGATTCCACAAGAGATGATGGGTGACGATGAAATGACTCGTTCAACCATTGTAGATTGTGATGAGCCAATGAGTTCATCTTCAGGGTCAGAGAACATGAGCATGGCTTGCACAGAGATTGTAAGGAAGAAGCGTAGTGGGTGGAATGTGTGTGCAAGATCAATGAGCAACAAGGTTTCCCATGAAGACATGGCCACTGGCATGAGCAGAAGGAAAGGCATTCCTCATAGATCTCCTTTGTGTTAG	723	0.4412	MIMGNLKPAWLEALYAQKFFVGCSYHENAKKNEKNICCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLHKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSSYLRTCKSLQLNSDFLIPQEMMGDDEMTRSTIVDCDEPMSSSSGSENMSMACTEIVRKKRSGWNVCARSMSNKVSHEDMATGMSRRKGIPHRSPLC	240

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium646g00037	240	MobiDBLite	consensus disorder prediction	221	240	-	-
	Vium646g00037	240	Pfam	PLATZ transcription factor	62	133	IPR006734	-
	Vium646g00037	240	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	6	239	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium646g00037	Vium-Chr646	365127	366924	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Vium646g00037		PLATZ	3.5e-26	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium646g00037	-		-	gmx:100810461	460.685