Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium646g00034 ATGGAACCTCAACTCCTCTTTCTCTCTTTCTTCCTTTCAGCACCTCTACTTTACTTCTTACTCGCCATTTATTTCAACCACCACCTCCTCCCTCCCTCTCCACGGTGGCGCCTCCCAATAATAGGGCACATGCACCTGTTGGGTCCTCTCCTCCACCAATCCCTCCACACCCTCGCCCTCCAACACGGACCCTTTTTCTCTCTTCACTTCGCTTCCCTTCCCTGTATCATTGTTTCTTCTCCCCACTACGCCAAACTCCTCCTCCACACCTACCAACACGCATTCATCAACCGCATGCAAACCATCGCCGTCAAACGCCTCACCTACGATTCCTCTCTGGCTTTCGCGCGCTACGGTGAGTACTGGAGGTTCATCAAGAAGCTCAGCATGAACGAGCTTCTGGGCTCACGCAGCATCAACAACTTCCGCCACCTGCGCCAGCAAGAGACACGTGGCTTTCTGAGGGTTCTGGCCCTGAAAGCCAAGGCTGGTGAAGCCGTTAATGTGACGGAGGAGTTGCTTAGGTTGACGAATAACGTTATTTCGAGGATGATGTTGGGTGAAGCAGAGGAGGGTGATGTGGTGCGTGGAGTGACAAAGATCTTCGGGGAGTTTAATGTTTCGGATTTCGTTTGGTTGTTGGGGAAATTGGACCTTCAGGGTTTTGGGAAGAGGATAGAGGATCTGTTTGTGAGGTTGGATGCTATGGTGGAAAGGATTATTTGCAAACGAGAGGAAATGAGAAGAAGAAGAAAAAGGGTTGAAAATGGAGATTGTGACGTGAGAGACTTTCTTGATGTTTTACTTGATTGTGTTGAGGATGAAAACTGCCAAGTCAAAATTAACAGGGTTCACGTTAAAGCCCTCATTGTGGATTTTCTGACAGCAGGGACTGATACCACAGCCATCTCAACAGAATGGGCATTGGTGGAGCTGATGAAGAACCCTTTGGTGGTAGAAAAAGCTCGAAAAGAGATGGAGAGTGTGGTGGGAAAAAACAAAGTTGTTGAAGAATGTGATTTTGAAAATCTACCTTACCTACAAGCCATTGTTAAGGAAACATTTCGTCTGCACCCAGCAGTGCCTATGGTTAACAGAATATGTGTTGCAGAGTGTAAGATTGAGAATTATGTGATCCCAAAGAACACACTACTGTTTGTGAATGTTTGGTCAATGGGAAGGAATCCAAAATATTGGGAGAAGCCATTAGAGTTTCGTCCGGAACGGTTCATGACGGTGGGTGAAGGAGGAGATTCGAATGGGGTGATGGATGTAATTGGTAAACATTTTGAACTTCTTCCTTTCGGTTGTGGAAGAAGAATGTGTCCTGGGGTATCTTTAGTGATGCAAGAGGTGCCAGCATTGCTTGGAGCTATCATTCAGTGTTTTGATTTTGAGGTGATGGATTCCAAAGGATTGAAGGCTGATGGTAGAGCGATTGATATGAATGAGAGGCCAGGATTAACGGCTCCAAGGACTCAGGACTTGCTTTGTCTTCCACTTCAAATATCCAATATACATCAAACAACTTAG 1533 0.4631 MEPQLLFLSFFLSAPLLYFLLAIYFNHHLLPPSPRWRLPIIGHMHLLGPLLHQSLHTLALQHGPFFSLHFASLPCIIVSSPHYAKLLLHTYQHAFINRMQTIAVKRLTYDSSLAFARYGEYWRFIKKLSMNELLGSRSINNFRHLRQQETRGFLRVLALKAKAGEAVNVTEELLRLTNNVISRMMLGEAEEAXDVVRGVTKIFGEFNVSDFVWLLGKLDLQGFGKRIEDLFVRLDAMVERIICKREEMRRRRKRVENGDCDVRDFLDVLLDCVEDENCQVKINRVHVKALIVDFLTAGTDTTAISTEWALVELMKNPLVVEKARKEMESVVGKNKVVEECDFENLPYLQAIVKETFRLHPAVPMVNRICVAECKIENYVIPKNTLLFVNVWSMGRNPKYWEKPLEFRPERFMTVGEGGDSNGVMDVIGKHFELLPFGCGRRMCPGVSLVMQEVPALLGAIIQCFDFEVMDSKGLKADGRAIDMNERPGLTAPRTQDLLCLPLQISNIHQTT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium646g00034 511 SUPERFAMILY Cytochrome P450 31 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 Gene3D Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vium646g00034 511 Pfam Cytochrome P450 31 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium646g00034 511 PANTHER STEROID 21-HYDROXYLASE-RELATED 17 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium646g00034 Vium-Chr646 324101 325930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium646g00034 30 502 Cytochrome P450 AT5G06900 42.355 2.72e-126 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium646g00034 K23179 - ag:BAA22423 671.389