Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium646g00024 ATGTTGAAGGAGAAGGGAGGGAGTCGGCCACCGTGGGTGGGGCTGGCCGCCGCCGTCTGGGTTCAGATCGCCGCGGGGAACACCCCCACCTTCCCACTTTATTCCCACTCCTTGAAATCAGTGCTGGGTTTCGACCAGCGCCACGTCACGCTCCTCGGTGTGGCCGTCGACGTCGGCGAAAACTTAAGCCTCCTCCCCGGCATCGCCTGCAACAAGTTCCCCCCTTGGCTCATCCTCCTCGTCGGTTCCCTCTCCGCCTTCCTCGGCTACGGCGTTGTGTACCTCGCCGTCTCCCAGACCCTCCCATCCCTTCATTTCTTACTGCTATGGTTTTGTCTTCTTATTGCTGCTAACAGTACTGCGTGGTTCACCACCACGGTTCTGGTGACCAACATGAGAAACTTCCCTGCTAGCAGAGGCTCTGTCGCTGGGGTTCTGAAAGGTTATGGGGGACTTAGTGCTGCCGTTTTGACTGAGATTTACAGCATTCTGCTTCGTAACAGTTCGTCTAAGTACCTGCTGTTTCTTGCCATTGGTATTCCTGTTATAGGCTTGAGTATGATGTTTCTCGTTAGGCCCTGTACGCCGGCCACTGGTGATGACCCTGCGGAGCCTTACCATTTTCAGTTTGTCCAAGTTTCCAGTGTGATAATGGGTGTTTACCTTCTTGTTAGTACCATACTTGGTAATGTCTACACGTTTAGCGATGCTGTTTCGTATGCTTTGGTGACCGTGATGGTTCTGCTTCTCATGGCTCCGCTTGCTGTCCCTTTGAAGATGACGCTGTTTCCAAGGAATGGGACTAAATCAGAGCAACAAGTTGGATCTTCTGAGTTTCTAATTCAAGGGAAAGAAGAGAGTGCGGCGCCGCTGCTGGCATCTTCGTCGGCGGGGGCACTTGGGAGTTTTAATGATCAGGATGATTTGCCTGAGGTTGCTGAGCTTCTTGCCTTGGGTGAGGGGGCTGTGAAGCAGAAGAAGAGAAGGCCTAAACGTGGAGAAGATTTTAAGCTAACTGAGGCTATAGTGAAGGCTGATTTCTGGCTTCTGTTTTTGGTCTACTTCGTTGGCGTCGGCACTGGGGTTACTGTTCTCAACAATCTCGCCCAAATAGGTATTGCCCGAGGGGAGGAAGACACCACCACCTTGCTGTCAATTTTCAGCTTTTGCAATTTTCTGGGGCGGCTTGGTGGAGGAGTTGTATCAGAACATTTTGTCAGGAAAAAATCACTTCCAAGAACTGTGTGGATGTTGTGCACGCAGATAATTATGCTCATTGTATACCTTCTGTTTGCTTATGCTATCAGCGGAACCCTTTACCCTGCAGTTGCATTCCTCGGTGTGTGCTATGGCGTGCAACTCTCCGTGATCATCCCCACTGTTTCTGAAGTTTTTGGTCTGAAGCATTACGGTGTACTGAGCAGCGTCATTGGGTTGGGGAATCCATTTGGTGCAGTGCTCTTTTCTGTTCTGCTAGCAGGGAACATATACGATAGTGAGGCAGCAAAGCAGCATGGTATAGACCTTATTGATTCTGGTGTTTCGTGCCTCGGTCCAAATTGCTTTAAGCTTACCTTTCTCATTCTTGCTGGGGTTTGTGCTGTTGGCATAATCTTGTGCGTTATCGTGACTATGAGAATTAAGCCTGTTTACCGAATGCTTTATGCTGGAGGCTCTTTCAGGCACCCTCAGATATCTTCAAGTCACTAA 1710 0.5006 MLKEKGGSRPPWVGLAAAVWVQIAAGNTPTFPLYSHSLKSVLGFDQRHVTLLGVAVDVGENLSLLPGIACNKFPPWLILLVGSLSAFLGYGVVYLAVSQTLPSLHFLLLWFCLLIAANSTAWFTTTVLVTNMRNFPASRGSVAGVLKGYGGLSAAVLTEIYSILLRNSSSKYLLFLAIGIPVIGLSMMFLVRPCTPATGDDPAEPYHFQFVQVSSVIMGVYLLVSTILGNVYTFSDAVSYALVTVMVLLLMAPLAVPLKMTLFPRNGTKSEQQVGSSEFLIQGKEESAAPLLASSSAGALGSFNDQDDLPEVAELLALGEGAVKQKKRRPKRGEDFKLTEAIVKADFWLLFLVYFVGVGTGVTVLNNLAQIGIARGEEDTTTLLSIFSFCNFLGRLGGGVVSEHFVRKKSLPRTVWMLCTQIIMLIVYLLFAYAISGTLYPAVAFLGVCYGVQLSVIIPTVSEVFGLKHYGVLSSVIGLGNPFGAVLFSVLLAGNIYDSEAAKQHGIDLIDSGVSCLGPNCFKLTFLILAGVCAVGIILCVIVTMRIKPVYRMLYAGGSFRHPQISSSH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium646g00024 569 Pfam Nodulin-like 11 258 IPR010658 -
Vium646g00024 569 CDD MFS_Mch1p_like 10 537 - -
Vium646g00024 569 SUPERFAMILY MFS general substrate transporter 221 549 IPR036259 -
Vium646g00024 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 552 - -
Vium646g00024 569 SUPERFAMILY MFS general substrate transporter 14 196 IPR036259 -
Vium646g00024 569 Gene3D MFS general substrate transporter like domains 342 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium646g00024 Vium-Chr646 184464 187255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium646g00024 2 569 Nodulin-like Gene Family AT1G80530 55.360 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium646g00024 - - gmx:100794012 885.945