Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6437g00062 ATGGATCACGAATCTGGCCAAGGATTTGACTCGGATGATAGTGACCTTGAAATGCAAGCAGAAATTAGTGAGAAACACCAGAAAATAGATGAATTTTCAAAAGACCTAGAATTATGTGGAAGTGAAGATGAGAAGTTTGTCGAACTACCTGCAACAGAGATTCCAACAGATATAGAAGCTGTTGAACCATTCATAGGCATGGAGTTCAATTCAAGAGAGGAAGCGAGAGAATTCTACATTGCCTATGGTAGGCGAATAGGGTTTACGGTACGAATACACCACAACCGTCGTTCACGAGTAAATAACCAAGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGTGCAAAAAAGTATGTACACAGAAAAGATAGGGTGCTGCCTCCGCCACCAGCCACTCGTGAAGGTTGTCAAGCCATGATAAGGCTGGCTTTACGGGATGGAGGGAAGTGGGTTGTCACCAAATTTGTAAAGGAGCATAATCATAAGCTAATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTTAGCGAGGATGAGAAGGATAGGAGAATCCGTGAGCTATCACTTGAGTTGTACAATGAAAGGCAAAAGTGCAAACGACGTTGTGCTGCATATGAAGAGCAGTTAAATATAATTCTGAATGATTTAGAGAAGCACACCGAACATATTTCTGAAAAAGTTGCTGCTGTAGTACGAAGTATTAGAGAGATTGAGGAGGAAAAATCAGATTCAGATGGTGGGTAA 765 0.4183 MDHESGQGFDSDDSDLEMQAEISEKHQKIDEFSKDLELCGSEDEKFVELPATEIPTDIEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKHLVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNIILNDLEKHTEHISEKVAAVVRSIREIEEEKSDSDGG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6437g00062 254 Coils Coil 202 229 - -
Vium6437g00062 254 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Vium6437g00062 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 247 - -
Vium6437g00062 254 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6437g00062 Vium-Chr6437 280824 285248 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vium6437g00062 FAR1 6.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6437g00062 - - gmx:100813124 483.411