Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6437g00056 ATGAATCTGCTCTCTCTGCACGGAACACAAAAACATAAAAGTAAATTTTCACAATCACGGTCGGTTCCTACGACAATCGAATTTGCGTCAGCCTCAATTCTCATGGAGTTTGGGATTGATGGCTCCATTAATGGTGAGACAGTAGGAAATGTTACTCTAGGGGAGATTAACAGTTGCAGCACACCTGATGAAAACAAAGTAGGTTGCAGCTCTTTCAATCCTGCTTATAAACATGATCATGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGCAGTATCAGTTGTTTCAGCTGATGAGCCCTATGTGGGACAGGAGTTTGATTCTGAAGCTGCAGCACATGCATTCTATAATGCATATGCCACCCGTGTTGGATTCATCATACGTGTGAGTAAGCTCTCACGATCAAGGCGTGACGGATCTGCTATTGGACGGGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCTGACAAACGTGAAAAGATTGTAAGGCAAAGGGCAGAGACTAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAGTTCCGGTAAATGGGTTGTTACTAAGTTTATACAGGAGCACACTCATCCTTTAACACCTGGAAAAGGTAGAAGGGATTGCATTTACGAGCAATACCCGAATGAACATGATAAAATTCGAGAACTGTCTCAGCAGTTGGCCATTGAGAAAAAACGGTCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCACATTGAAGAGCATAATGAAAGCCTTTCAAAGAAAATACAACACATAGTGGACAGTGTGAAGGAGATGGAAACCAAAGAACAACAGAGTCATAGATAG 867 0.4198 MNLLSLHGTQKHKSKFSQSRSVPTTIEFASASILMEFGIDGSINGETVGNVTLGEINSCSTPDENKVGCSSFNPAYKHDHDDNITQDSSGGDTIPSGIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIQEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVDSVKEMETKEQQSHR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6437g00056 288 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 58 285 - -
Vium6437g00056 288 Pfam FAR1 DNA-binding domain 124 210 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6437g00056 Vium-Chr6437 259035 261971 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vium6437g00056 FAR1 8.4e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6437g00056 - - gmx:100806900 449.514