Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6437g00029 ATGGAGAGAAGTATGCGTGTGGCTTTTCCACTTGTAGTTTTTGCAGTGGCGAGCCTATGTTATGGGATGGCAGACGCAGCAGTGGTGAGGTCTCCGCCGACGAATTTGAAGTGGCATTATTACAAGATCAGCAATACATGCCGCGACGCGGAGGAGTACGTCCGGCACCAAGTTAAACTGTTTTGGGATAGTGACAGAAGCATTACGGCAAAGCTCCTCCGCTTGGTTTACACCGACTGTTTTGTCACGGGATGTGATGCGTCCATTCTGCTTGACGAAGGACCAAATCCAGAGAAAAAAGCGGCACAAAACCGGGGGCTTGGAGGATTTGTAGCCATTGACAAGATCAAATATGTTCTCGAATCACGATGCCCTGGAAAAGTCTCCTGTGCTGATATACTTCACCTCGCCACCAGAGATGCTGTTCATCTGGCAGGTGGACCATCTTACCCAGTTTTAACAGGAAGAAAGGACAGCAGTACATCAGATGCTGCATCGGTAGACCTTCCATCACCATCCATCTCGCTGCAGGAACTTCTAGTGTATTTCAGATCGAGGAACTTGAATGAAGTACACATGACAACACTTCTAGGAGCACACACACTGGGGAGAACACATTGTAGCTACATTGTTGACCGCCTGTACAACTACGCCGGGACCGGCAAACCCGATCCAAGCATGAGTGCCACTCTACTAGAGTCACTTAGGAAACTTTGCCCGCCAAGGAAGAAGGGACAGCCAGATCCTCTGGTATACCTAAACCCAGAGTCTGGATCAAATTACAACTTCACAGAGTCATACTACAGAAGGATCCTATCCAACGACGCTGTCCTAGGAGTTGATCAACAATTACTAAATGGTAATAACACTAAACAGATAACCGAGGAGTTCGCCGCGGGATTTGAAGATTTTCGGAAAAATTTTGCCGCAGCAATGTACCAAATGGGGAATTTCAAGGTTTTAACGGGAAACCAAGGTGAAATACGCAAAAATTGCCGATATGCAAATAAGTAG 1014 0.4704 MERSMRVAFPLVVFAVASLCYGMADAAVVRSPPTNLKWHYYKISNTCRDAEEYVRHQVKLFWDSDRSITAKLLRLVYTDCFVTGCDASILLDEGPNPEKKAAQNRGLGGFVAIDKIKYVLESRCPGKVSCADILHLATRDAVHLAGGPSYPVLTGRKDSSTSDAASVDLPSPSISLQELLVYFRSRNLNEVHMTTLLGAHTLGRTHCSYIVDRLYNYAGTGKPDPSMSATLLESLRKLCPPRKKGQPDPLVYLNPESGSNYNFTESYYRRILSNDAVLGVDQQLLNGNNTKQITEEFAAGFEDFRKNFAAAMYQMGNFKVLTGNQGEIRKNCRYANK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6437g00029 337 CDD secretory_peroxidase 35 333 IPR033905 GO:0004601|GO:0042744
Vium6437g00029 337 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 Pfam Peroxidase 54 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 ProSiteProfiles Plant heme peroxidase family profile. 35 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 Gene3D Peroxidase, domain 2 170 315 - -
Vium6437g00029 337 PANTHER PEROXIDASE 25-RELATED 18 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 FunFam Peroxidase 170 315 - -
Vium6437g00029 337 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium6437g00029 337 Gene3D - 40 336 - -
Vium6437g00029 337 SUPERFAMILY Heme-dependent peroxidases 41 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6437g00029 Vium-Chr6437 115502 117340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6437g00029 9 336 Peroxidase AT5G24070 64.545 2.62e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6437g00029 K00430 - gmx:100797875 556.214