Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6437g00004 ATGGCGTACCAGACCCCTGATCGAGATTCTGAATCGGATCCGAAGACACCAACGCGTCTCTATAACCCCTACAAGGACCTTGAAGTCCCCATTCGCAACCTCTACCAGCTCCCGACTTCCCCCGAGTATCTCTTCGTCGAGGAGGCTCGCCGCAAGCGTCGATCTTGGGGCGAGAACCTCACCTTCTACACAGGATGTGGCTACCTTGCCGGCGCCGTCGGCGGTGCCACCGCCGGCCTCGTCGAAGGCGTAAAGTCCTTCGAGTCCGGTGACACCGCCAAGCTTCGCATCAACCGCGTCCTCAACTCCTCCGGTCATGCCGGCCGAGCCTGGGGCAACCGCCTAGGCGTCATTGGCCTGCTATACGCCGGCATCGAGAGCGGGATCGAGGCGGCGAGGGACACCGACGATGTCTGGAACAGCGTTGCGGCCGGACTCGGCACTGGCGCATTGTATCGTGCCGCGAGAGGGGTGCGGTCGGCGGCCGTGGCGGGGGCTGTTGGCGGCGTCGTGGTTGGAGTTGCTGTCACCGCGAAGCAGGCATTGAAACGCTACGTGCCTATTTGA 567 0.6314 MAYQTPDRDSESDPKTPTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGATAGLVEGVKSFESGDTAKLRINRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIEAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6437g00004 188 PANTHER TIM23 32 177 IPR045238 GO:0022857
Vium6437g00004 188 MobiDBLite consensus disorder prediction 1 21 - -
Vium6437g00004 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6437g00004 Vium-Chr6437 13051 14058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6437g00004 9 188 Chloroplast and Mitochondria Gene Families AT1G72750 69.945 1.56e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6437g00004 K17794 - gmx:100777112 315.849