Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6436g00036 ATGATTAGTGTGAAGGAGTCGACAATGGTGCAACCTGCGGAGGCGACACGGCGGAAGGTGTTGTGGAACTCAGATCTGGATTTGCTGGTGGGGAATTACCACACTCCCAGTGTCTATTTCTACAACCCAAACGGAGCTTCCAATTTCTTCCATTCCAACATCTTGAAAGAAGCTCTCAGTAAGACCCTCGTCATTTTCTACCCGATGGCCGCCCGTCTCCGCCGCGGTGACGACCACCGCGTGGAGATTTATTGTGACGGTCAAGGTGTACTCTTCGTTGAGGCTCATGCCACCGTTGCCATGGACCACTTCACTGAAAACCTTCACCATCGCAACCTTATCCCCACGGTGGATTATTCCGCCGGTATTGAAACATATCCGATAGTGGTGTTACAGATAACATATTTCAAATGTGGAGGGGTGTCATTAGGTGTTGGTCTGCAACACCACGTGGCAGATGGAGCATCCGGGATTCAGTTCATCAATGCATGGTCCGATGTGGCTCGTGGCTTAGACATTTCCGTTCCTCCGTTCATTGACAAGACCCTACTTCGTGCCAGGGACCCACCTCAACCTGTTTTTCCTCACCACGAATACCAGCTCTCACCACCCGCCGCTGCCACCACCACCACTACTGTAGTTGCCTCTATCTTAAAATTGACTCGTCACCAACTGGACACCCTCAAGGATAAGTGGAAAGAAGGTGGCAACAGCATCAAATATAGCACTTACGAGATGTTGGCAGCTCATATATGGATAAGTGTGTGCAAAGCAAGAGGCCTTGGAGCTGAGCAAGAAACCAGACTGTATATTCCGATTGATGGAAGGGGGAGGCTGCAACCTCCCCTCCCTCCTGGTTACTTTGGCAATGTCATTTTCTCCACCATTCCCGTCGCAGTGGTAGGAGAACTCGTGTCAAAACCTACATGGTATGCTGCGGACAAAATCCATAAAGCAATAATGAGAATGGACAACGAATATTTGAGGTCAGCTGTTGACTATCTAGAGCTACAACCTGATCTGAATGGTCTTGTTCGTGGGGCACATACTTTTGCTTGTCCAAATGTTGGTATCAATAGCTGGGTCAAGTTTCCGATCTATGATGCTGACTTTGGTTGGGGAAGACCCATCTTCATGAGACCTGGTTGGATTATACACGAGGGGCTATCAATCATAATTCCAACCTCAACAAATGATGGCAGCTTATACTTGACAATTGCTCTACCACCTCACCATATGAACTTGTTTCAACAATTCTTTTTTGACATTTGA 1272 0.478 MISVKESTMVQPAEATRRKVLWNSDLDLLVGNYHTPSVYFYNPNGASNFFHSNILKEALSKTLVIFYPMAARLRRGDDHRVEIYCDGQGVLFVEAHATVAMDHFTENLHHRNLIPTVDYSAGIETYPIVVLQITYFKCGGVSLGVGLQHHVADGASGIQFINAWSDVARGLDISVPPFIDKTLLRARDPPQPVFPHHEYQLSPPAAATTTTTVVASILKLTRHQLDTLKDKWKEGGNSIKYSTYEMLAAHIWISVCKARGLGAEQETRLYIPIDGRGRLQPPLPPGYFGNVIFSTIPVAVVGELVSKPTWYAADKIHKAIMRMDNEYLRSAVDYLELQPDLNGLVRGAHTFACPNVGINSWVKFPIYDADFGWGRPIFMRPGWIIHEGLSIIIPTSTNDGSLYLTIALPPHHMNLFQQFFFDI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6436g00036 423 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 418 - -
Vium6436g00036 423 FunFam Tryptamine hydroxycinnamoyl transferase 201 421 - -
Vium6436g00036 423 Coils Coil 423 423 - -
Vium6436g00036 423 Gene3D - 198 423 IPR023213 -
Vium6436g00036 423 Pfam Transferase family 2 418 - -
Vium6436g00036 423 Gene3D - 1 197 IPR023213 -
Vium6436g00036 423 FunFam Spermidine hydroxycinnamoyl transferase 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6436g00036 Vium-Chr6436 213902 215683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6436g00036 2 423 Monolignol Biosynthesis Gene Families AT5G48930 62.356 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6436g00036 K13065 - gmx:100801923 606.675