Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6436g00023 ATGGCAGATCTCAAGGAGAGGCTGCTACCACCAAAACCTGCTTCGGCTCTTAATGTAAGAGAGGTTGCCAATCGACCATCTGCCTCTGGAAGGCATGCTTTCCAAGGGGTGGATGTTCTGGGGTTAAAGAAGCGAGGCCAAGGTCTCCGATCATGGATTCGTGTTGACACATCTGGAAACTCTCAAGCCATTGAAGTAGACAAGTTTACCATGATGCGACGTTGTGATCTACCTGCTCGTGATCTTCGCCTACTTGATCCCTTGTTTGTCTACCCATCAACAATCCTTGGCAGGGAAAAAGCTATTGTTGTAAATCTGGAGCAGATACGGTGTATCATTACAGCAGATGAAGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCACTATGTAATGGAGCTACAACGACGGTTGACAGCAACTGGGGTAGGGGAGGTTTGGCCATCAGAGGGTTCTGACATGAACCGAAGGAGGGGAAGTAGGAATTTTGATAATGTATTTAGCAACTCTTCCCCCGATTATTTACCTTTCGAGTTCAGGGCCCTTGAAGTAGCCCTGGAGGCGGCATGCACATTTCTTGATTCTCAGGCAGCAGAGTTAGAAATTGAAGCTTATCCCTTGTTGGATGAACTGACATCAAAGATCAGTACTTTAAATTTGGAACGTGTTCGTCGATTAAAAAGCAGACTTGTTGCGTTGACCAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGACGATGATGGTGACATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGAATGGAGTTGTCATTTTACGGAGATCAGTCTATGGTTGGATATAAATCAGTTGATGGTGCATCCATTTCTGCCCCGGTTTCTCCTGTGTCATCACCTCCTGATTCTCGAAAGCTAGAAAAGAGCTTCAGTATTGCTAGAAGTCGACATGAGAGCATGCGAAGTTCTGAAAGTACTACGGAAAGTATAGAGGAACTTGAGATGTTGCTGGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATAAACATCCAACTGGTTTGTTTTCTTTTCCCGGGGTTTATGCCAATTTTATTTATCCTATTTTGGTAG 1155 0.4346 MADLKERLLPPKPASALNVREVANRPSASGRHAFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTATGVGEVWPSEGSDMNRRRGSRNFDNVFSNSSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPPDSRKLEKSFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLVCFLFPGFMPILFILFW 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6436g00023 384 Gene3D Magnesium transport protein CorA, transmembrane region 130 368 - -
Vium6436g00023 384 CDD Mrs2_Mfm1p-like 52 367 IPR039204 -
Vium6436g00023 384 Coils Coil 224 251 - -
Vium6436g00023 384 FunFam Magnesium transporter MRS2-1 40 123 - -
Vium6436g00023 384 Gene3D - 39 123 - -
Vium6436g00023 384 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 23 367 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6436g00023 Vium-Chr6436 125347 131468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6436g00023 1 367 MRS2 Gene Family AT1G16010 85.054 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6436g00023 K16075 - gmx:100779803 632.098