Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6436g00021 ATGCTGATCAACGTCAAGCAATCCACCATGGTGCGTCCGGCGGAGGAGACGCTGCGGATGGCGCTGTGGAATTCCAACGTCGATTTGGTGGTGCCAAACTTCCACACGCCCAGCGTCTATTTCTATAGGCCAAACGGGGCCTCCAATTTCTTCGACACAACCGTTATGAAGGAGGCTCTCAGTAAGGCCCTCGTCCCTTTCTACCCCATGGCCGCCCGCCTCCGCCGCGACGACGACGGTCGCGTCGAGCTTTTTTGCGACGGTCAGGGAGTGCTCTTCGTCGAGGCTGACACCACCGCTGCCATCGACGACTTCGGTGACTTCTCACCCACCCTTGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCTGCCGGGATCGAAACTTATCCGCTCTTAGTGCTTCAGGTAACATATTTCAAATGTGGAGGGGTGTCATTAGGTGTTGGTATGCAACACCATGTAGCAGATGGAGCATCGGGTCTTCACTTCATCAATACATGGTCCGATGTTGCTCGAGGTTTGGATATTTCCCTCCCTCCGTTCATCGACAGGACACTGCTCCGTGCTCGAGATCCACCTCGTCCTGTTTTTGATCACATTGAATACAAGCCTGCACCAACCATGAAGACCAACCTGCAACCCCAAAAACCAGGCTCTGATGACCCTGCTCCTGCCGTCTCCACTTTCAAACTGAGTCGTGACCAACTCAACAGCCTCAAGGCTAAGTCCAGAGAGGATGGCAACTCAATCAGCTATAGCTCTTATGAGATGCTGGCCGGTCATGTATGGAGAAGTGTGTGCAAGGCAAGAGCACTCCCTCATGACCAAGAAACCAAATTGTATATTGCAACTGATGGAAGGTCAAGGCTGCAACCTCCCCTTCCCCCTGGTTACTTTGGCAATGTCATCTTCACCACCACTCCTGTAGCAGTGGCCGGCGATCTCATGTCAAAACCAACATGGTATGCTGCCAGCAGAATCCACGATGCATTAATGCGAATGGACAACGAATATTTGAGATCGGCTCTTGACTATCTAGAGCTACAGCCTGATCTAAAAGCGCTTGTTCGTGGATCACATACTTTTAGGTGTCCCAACCTTGGCATCACTAGCTGGGTAAGGCTTCCAATCCATGATGCTGACTTTGGGTGGGGAAGACCCATTTTCATGGGACCTGGTGGGATTGCCTACGAGGGGCTTTCTTTCATTATTCACAGCTCAACAAACGATGGCAGCATGTCTGTGGCAATAGCTCTTCCTCCTGACCGAATGAAAGTGTTTCAGGATTTGTTTTATGACTTTTGA 1308 0.5153 MLINVKQSTMVRPAEETLRMALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDTTVMKEALSKALVPFYPMAARLRRDDDGRVELFCDGQGVLFVEADTTAAIDDFGDFSPTLELRQLIPAVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDISLPPFIDRTLLRARDPPRPVFDHIEYKPAPTMKTNLQPQKPGSDDPAPAVSTFKLSRDQLNSLKAKSREDGNSISYSSYEMLAGHVWRSVCKARALPHDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPVAVAGDLMSKPTWYAASRIHDALMRMDNEYLRSALDYLELQPDLKALVRGSHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIHSSTNDGSMSVAIALPPDRMKVFQDLFYDF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6436g00021 435 Gene3D - 1 205 IPR023213 -
Vium6436g00021 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 432 - -
Vium6436g00021 435 FunFam Tryptamine hydroxycinnamoyl transferase 212 433 - -
Vium6436g00021 435 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Vium6436g00021 435 MobiDBLite consensus disorder prediction 200 227 - -
Vium6436g00021 435 Pfam Transferase family 3 433 - -
Vium6436g00021 435 Gene3D - 219 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6436g00021 Vium-Chr6436 108414 110860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6436g00021 1 434 Monolignol Biosynthesis Gene Families AT5G48930 76.498 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6436g00021 K13065 - gmx:100801923 795.423