Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6432g00017 ATGGGTTCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATATGACAGAGGAGATTCCAGTTCTTTACCTGTGGGTCAAAATCACCATAACAAGGGTCAGAGCAGTACCATATCTTTTGGTGGTTTTCATGATGATCCTGAAGCAAATCCCTCTGGTGGAATAATTAGTGGCTATGATCTGTTGATAGGAAACCAAAACTCAGCTCAAGGTTTGGATGGTCAGAATGATCTGACTGAAACAAACACTGAATCACTTGTAAATAGCATTCCAAAACTTAATACTAAAAATGATATTTTTGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCTACGAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACCGGTATTTTTGATGGTGTCCAGTTTGAAGAATATGCTTGGCAGAAAAGTCTTAAAGGAATCATAAAAGGAACTGGGTATTTGTGTTCATGTGATGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCCAATAATCACATATACTTCGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAACTGAAAAATACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAGGATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTACGGAAAGGATGAAGTGATAATTCCATCATGA 777 0.3874 MGSTYDKVDSNIASTVPSYDRGDSSSLPVGQNHHNKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGNQNSAQGLDGQNDLTETNTESLVNSIPKLNTKNDIFVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQFEEYAWQKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRGWKASYQAATRELQRIYGKDEVIIPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6432g00017 258 MobiDBLite consensus disorder prediction 1 53 - -
Vium6432g00017 258 MobiDBLite consensus disorder prediction 1 45 - -
Vium6432g00017 258 Pfam Tify domain binding domain 151 206 IPR032308 -
Vium6432g00017 258 PANTHER AUTOIMMUNE REGULATOR 24 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6432g00017 Vium-Chr6432 91432 93100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6432g00017 115 239 PHD Transcription Factor Family AT3G53680 52.756 8.10e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6432g00017 - - vum:124843236 514.227