Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium6428g00045 | ATGGCTACCGATGCCCGTGACTCGCGTCACAAGCATCGCCGATCACCCTCCCCGGAGGATGTGGACAGATCCTCGAAGCGCCACAAGCACCGCCACCGCCATCGCCACCGCCACGGGAACAAAAAGCGCGATGAAGATATTGAATTCGACGATCGAACAATTGCTGCTGTTCCTTCTCCAACTCCGCATAGACATGCACAGGAGGACGATGTGGAGGAAGGAGAGATCCTCGACGACGAAGCTCTCGATAGCGAGGTAGGGAAAAAAGAGACTGAATCTGATGTCGAACCTGGTGAAATCAAGGTGACTGGAGATCGAGATGTTCAATCCGATAATCAAAATTCGGGACACCTCACTGTAAATTCAGAAACTAATGAGGACATCAGGATTGATAAATTTATTAGTCCTGCAACCAATACAGATGGTGTCTCTCCTAATCGTTTAAGTGCTGAGACTCAAGATGGAAAACATGCTACAGATGGTCTGGACAATGGTTATTTGAATCCTAAATCTTCCAGGGCAGATAAGTGGCGGAATGGTGAGCTTGGACATTTTAAAGGGAATGAGAAACTAAAAGGTGACTTTGATGCACTGGAGGCTAATGTTAGGAAAACACATTTCCATAGGAATTCGTCATCCGAAAGTGGTGGAGACAAAGGTAGAATATCAGGAAGTTCTCCTTCTCATGGCAGATATAGAAGTCGATCAAGATCAATTGGTCATACAAGAGACCGGTCTCGTTCTCGTAGTGTCATAGATGAATATGTTCATTCCAAGAGAAGGCGCTCTGAATATGACTATGATGAGGAAAGAGTGAGGGCACGTGGAAGGGAACATGGTCATGGAAGTGTGGTAGATGATAGAAGGGAATACAGTAGTGGATATCACAATCGCGATGCCCATGATAGAGATAGGAGTAGGGATAGAGACTTGTACAGAGAAAAAAAACAAGAGGAAACAAGCAGGGGTAAGGAGATTGAGAGGGACCGTCAAAGGGTAAAGGAACGTGAAAGGAGCCGTGAGAGATATAAAAGGGATGTAGAAAAAGATAGGAGCAGGGAAAGGGAGGATAGGGACAGGAGGCAAGAAAAGGAAAGAGATAGGAGCTGGGAGACGGTGTTTGAGAGGGATATGAGAAGGGAAAAGGAAAGAGATAGGAGTAGGGACAGAACAAGAGATGCTAAGAGAGATAGAGACCTGGAGAATGAAAGGGATGATAAGAATCGAGAAAGGGATAATATTAAGGAGAGGGCAAGGCGAGATGATAGATATAGGCACAAGGATAGAGACACTGCAAATGGTAAAGATAGGCATGTGCGTCATGAAGATGGTAATGACAATGGAGATAAATATAGAAAACATTCGAGACATGAAGAAAATGATTACCATTGGGATAGAAAAATAAATCCTGGTAATCCTGTAAAGGATTATACTTCAAGGGGGGGAAGTACTGCAGAAGTGGGTGAAAGCAAACTAACAAGCAGTGAGGTTGAACCAGATGACTTAGAGGAGGATACATTGCACTTACCTGACCAAGAAGAGGAAGATCTCAACAGGATCAAAGAAGAAAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTAGAAGTGGTTGGAAATGAACGAAAAGACAAGGATACAGACATTCAAACTGAAACCTCTGAAGCACATGATGGTCAGAATGATGATGCCGATTATGTGGAGCCATCATTTACTGTTGGAAAATCTCCTGAAAATGTGACTGTTGCTTCTCAGAAGATATCTCTTGCTGGAGGCCTGGGAGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGACAAGTACTGTGACGATATATTTGGGGAGACACCAACGGGAGTTCGAAAATCAGGAAAAGGTGATGGTTTAATGATTGAAAGGGTTGGCCTACATGATAACTGGGATGATGCAGAGGGATACTACAGCTATCGAATTGGTGAAATACTTGATGGCCGGTATGAAGTCACTGCTGCACACGGGAGGGGTGTCTTTTCAACAGTTGTTCGGGCAAAGAATCTGAAGGTGGGAAATGGTGAGCCAGAGGAAGTAGCAATAAAAATAATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAACGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTCCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATACGCAAAACAGCTTTTTATTGCCTTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGACATAAAGCCAGATAATATGTTGGTAAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCAATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTGCCCCAGAAATAATACTTGGCTTGGCATATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAGTTATATGTAGGTAAGGTTCTTTTCCCTGGGCTTACTAACAATGACATGCTGCGACTTCACATGGAACTGAAGGGCCCATTTCCAAAGAAGATGCTACGAAAGGGAGCATTTACTGAACAACATTTTGATCAGGACCTGAATTTTCTTGCAACCGAGGAAGATCCTGTGACAAAAAAGGCCATAAAGCGGCTGATTCTCAACATTAAGCCAAAAGATATTGGAACACTTATCACTGGCTCTTCCGGGGAGGATCCAAAAATGTTGGCCAACTTTAGGGATCTTTTGGAAAAAGTTTTTGTCCTGGATCCAGACAAGAGGCTGACAGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCGTACACTTTACTGGCGGTTCTTTCAGTGGAATGTACTGTTTCTATTGTAAGACAACTTGCCAATGGCAGTTTCCTTTAGTGTAG | 3030 | 0.429 | MATDARDSRHKHRRSPSPEDVDRSSKRHKHRHRHRHRHGNKKRDEDIEFDDRTIAAVPSPTPHRHAQEDDVEEGEILDDEALDSEVGKKETESDVEPGEIKVTGDRDVQSDNQNSGHLTVNSETNEDIRIDKFISPATNTDGVSPNRLSAETQDGKHATDGLDNGYLNPKSSRADKWRNGELGHFKGNEKLKGDFDALEANVRKTHFHRNSSSESGGDKGRISGSSPSHGRYRSRSRSIGHTRDRSRSRSVIDEYVHSKRRRSEYDYDEERVRARGREHGHGSVVDDRREYSSGYHNRDAHDRDRSRDRDLYREKKQEETSRGKEIERDRQRVKERERSRERYKRDVEKDRSREREDRDRRQEKERDRSWETVFERDMRREKERDRSRDRTRDAKRDRDLENERDDKNRERDNIKERARRDDRYRHKDRDTANGKDRHVRHEDGNDNGDKYRKHSRHEENDYHWDRKINPGNPVKDYTSRGGSTAEVGESKLTSSEVEPDDLEEDTLHLPDQEEEDLNRIKEESRRRREAIMEKYKKQHQQVEVVGNERKDKDTDIQTETSEAHDGQNDDADYVEPSFTVGKSPENVTVASQKISLAGGLGEGTPKSERSEDKYCDDIFGETPTGVRKSGKGDGLMIERVGLHDNWDDAEGYYSYRIGEILDGRYEVTAAHGRGVFSTVVRAKNLKVGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLAYDHPLDIWSVGCCLYELYVGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKAIKRLILNIKPKDIGTLITGSSGEDPKMLANFRDLLEKVFVLDPDKRLTVSQALNHPFITGVHFTGGSFSGMYCFYCKTTCQWQFPLV | 1009 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 174 | 193 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 237 | 470 | - | - | |
Vium6428g00045 | 1009 | PANTHER | DUAL SPECIFICITY PROTEIN KINASE | 368 | 981 | - | - | |
Vium6428g00045 | 1009 | Gene3D | Phosphorylase Kinase; domain 1 | 635 | 724 | - | - | |
Vium6428g00045 | 1009 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 792 | 804 | IPR008271 | GO:0004672|GO:0006468 | |
Vium6428g00045 | 1009 | FunFam | Serine/threonine-protein kinase PRP4 homolog | 725 | 981 | - | - | |
Vium6428g00045 | 1009 | Coils | Coil | 326 | 346 | - | - | |
Vium6428g00045 | 1009 | SMART | serkin_6 | 665 | 980 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 538 | 571 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 81 | 106 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 216 | 233 | - | - | |
Vium6428g00045 | 1009 | Pfam | Protein kinase domain | 667 | 980 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium6428g00045 | 1009 | CDD | STKc_PRP4 | 664 | 980 | IPR044092 | GO:0004674|GO:0006468|GO:0045292 | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 512 | 526 | - | - | |
Vium6428g00045 | 1009 | ProSiteProfiles | Protein kinase domain profile. | 665 | 980 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium6428g00045 | 1009 | FunFam | serine/threonine-protein kinase PRP4 homolog | 635 | 724 | - | - | |
Vium6428g00045 | 1009 | Gene3D | Transferase(Phosphotransferase) domain 1 | 725 | 981 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 107 | 123 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 206 | 526 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 1 | 193 | - | - | |
Vium6428g00045 | 1009 | SUPERFAMILY | Protein kinase-like (PK-like) | 652 | 985 | IPR011009 | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 476 | 491 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Vium6428g00045 | 1009 | MobiDBLite | consensus disorder prediction | 137 | 152 | - | - | |
Vium6428g00045 | 1009 | Coils | Coil | 397 | 420 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium6428g00045 | Vium-Chr6428 | 166915 | 173207 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium6428g00045 | 672 | 984 | MAP Kinase Gene Family | AT4G01370 | 33.851 | 1.50e-28 | 117 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_DYRK-PRP4 | Vium6428g00045 | Pkinase | 6e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium6428g00045 | K08827 | - | gmx:100776908 | 1600.1 |