Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6428g00016 ATGGCTACTCTTACCTCAAACGCATACATTAGCCCACAATACAATGTTCCCAAAGACCATCATCTACCTCATGGTTGTGTAGTTGAGGAAATATCAGGGCTTATTAGAGTTCACAAAGATGGATACGTGGAACGACCACAAGTTCTTCCATGTGTCACTGCTAGTACTATTAGTCCAGAGCTAAATGTGACATCTGGAGACATGGTCATTGACAGTGCCACGAACACATGGGCACGTTTTTACGTTCCAATTTGCCAACACGAGTTGCCATTGCTCGTTTATTTCCACGGTGGAGGCTTTTGTGTTGGGTCAGCTGCATGGAGTTGCTATCATGATTTCCTTGCAAGGCTGTCTGCCGAAGTGCGGTGTGTGATTATGTCAGTGAACTATCGATTGGCCCCAGAGAACCCTCTTCCAGCACCCTATGACGACGGATTAAAGGCCCTAATGTGGGTGAAGCAACAAATGCTATATGAACAACACAAGGGTAGTGGTAGTAACAGTGAATGGTGGACTACAAAGTGTAACTTCTCCAGTGTCTTCTTGGGCGGGGACAGTGCTGGTGCTAACATAGCCTACAACGTTGCCACAAGGGTAGCTGCATGTGATGGTGTTGCTTTAAGGCCTTTGAGTCTGAAAGGTCTTATTTTGATACAACCCTTTTTCGGTGGGGAAGTAAGAACAGGTTCTGAGAAATGCATGGCTCAATCATCGGGTTCTGCTTTGAACTTGGCAGCATCTGACACTTATTGGCGCTTGGCGTTACCCTGCGGTGCGAACCGGGACCATCCGTGGTGCAACCCTTTGGTGAAAGTGAAGTTGGAGCAGTTGAAGGTCTTGCGTACCTTGGTGTGCATCTCGGAGATTGATATATTGAAAGATAGGAACTTGGAGTTTTGTGATACTTTGGTTAGAGCAGGGAAAAGGGTTGAGTTTGAGCTGTTCAGAGGTGTTGGACATGCGTTTCAGATTTTGGGTAAGTCTCAGATATCCAAGAACAGAACTAAGGAAATGATGGCTCGTGTTAAATCCTTCATGGCTCTCTGA 1047 0.4613 MATLTSNAYISPQYNVPKDHHLPHGCVVEEISGLIRVHKDGYVERPQVLPCVTASTISPELNVTSGDMVIDSATNTWARFYVPICQHELPLLVYFHGGGFCVGSAAWSCYHDFLARLSAEVRCVIMSVNYRLAPENPLPAPYDDGLKALMWVKQQMLYEQHKGSGSNSEWWTTKCNFSSVFLGGDSAGANIAYNVATRVAACDGVALRPLSLKGLILIQPFFGGEVRTGSEKCMAQSSGSALNLAASDTYWRLALPCGANRDHPWCNPLVKVKLEQLKVLRTLVCISEIDILKDRNLEFCDTLVRAGKRVEFELFRGVGHAFQILGKSQISKNRTKEMMARVKSFMAL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6428g00016 348 PANTHER ARYLACETAMIDE DEACETYLASE 29 331 - -
Vium6428g00016 348 Gene3D alpha/beta hydrolase 33 347 IPR029058 -
Vium6428g00016 348 SUPERFAMILY alpha/beta-Hydrolases 41 344 IPR029058 -
Vium6428g00016 348 Pfam alpha/beta hydrolase fold 92 323 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6428g00016 Vium-Chr6428 140174 141416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6428g00016 1 346 Carbohydrate Esterase AT5G16080 53.258 4.53e-121 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6428g00016 - - vra:106771583 688.723