Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6428g00007 ATGGCGATGGGTGCAGTTTCCATGGGTGTGAATGGATGGGGAGACATGAAGAGTCTCACCCTCCAGGTCATCACCGGTCGATGGTTCGTCATCTTTGCCTCCTTTCTAATCATGGCTGCTGCCGGAGCCACCTACATGTTCGGTCTCTACTCCGGAGACATCAAAGAAACCCTTGGCTACGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAGGACTTTGGTAGCAACGTCGGAGTCCTGTCTGGTCTTATCAACGAGCTCACTCCACCTTGGGTGGTCCTCGCCATCGGTGCCGTTCTAAACTTCTTTGGCTACTTCATGATATGGCTTTCCGTCACTAGGAGAATAGCCAGACCCCAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCAAACACCGGTTCCCTAGTCACCTGTGTCAAGAACTTCCCTGAAAGTCGTGGTGCTGTGTTGGGCATTCTCAAAGGCTATGTGGGTCTCAGTGGTGCAATCATCACACAATTGTACTCTGCTATTTACTATGACGACACAAAGGCTTTGATTTTGCTCATAGGTTGGCTCCCAGCTGCTATTTCCTTTGCTTTCCTTCGAACCATTCGCTACATGAAGCCCGTTAAGCAGCCCAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATTATTATACAGAAAAGGGCCGACTTTACTCAGAGTGAGTACGGTGTGAGCGCCGGTATTGTGGTTTTCTTGCTCTTCCTCCCACTTCTTGTCGTTTCAATAGAAGAGCATAAGATCTGGCACAGTAAAAGACTTGCTTTGGTTGACCCCTCGCCCGTGAAAATAGTGACTGAGGGTGAAAAAGTGAAACAGAATGAGACTACTAATGGGAACACTTCAGTTACAGCGATTTCCAACGACACCAAGTGGTGGGAAAATGTTTTCAGTCCTCCAGAAAGAGGTGAGGACTACACGATACTTCAAGCGCTATTCAGCGCCGACATGTTAATACTTTTCATAACTTGCATATGCGGTGTTGGGGGCACGCTCACTGCAATAGACAATTTGAATCAGATAGGATCCTCTCTTAGATACCCAAAGAAAAGTATAAGCACTTTCGTGTCCCTAGTGAGCATTTGGAACTATATGGGAAGGGTTTTCTCTGGATTTGTTTCTGAACATTTCCTCAACAAGTACAAGTTTCCACGTCCTCTCATGCTTTCTTTAACTCTGCTCTTATCGTGTGTTGGTCACCTTCTGATAGCATTTGATGTGCCAGATGGACTTTATGCTGCTTCGGTGATCATCGGGTTTTGTTTTGGCGCTCAGTGGCCTTTACTTTTTGCCATTATATCAGAGCTTTTTGGACTAAAATATTATGCAACTTTGTACAACTTTGGAAGCGTAGCAAGTCCATTAGGGTTATATGTGCTTAATGTGAAAATGACTGGGTATTTGTATGACAGAGAAGCAAAGAAGCAACTGGCAGCTTTGGGGCTTGAGAGAAAGGAAGGCGAGCAATTGAACTGTATCGGGGTGGACTGCTTCAAGTTATCATTCATTATTATCACAGCTGCAACTTTCTTTGGTGCCATTGTTTCACTGATTTTGGTGGCTAGAACAAGAAAGTTTTACAGTGGTGACATATACAAGAGATTCCAGGATGCAGCCACGGTGTCAGAAACTGAAATGGCAGGGTTAGAGAACACCGGCAAACCAAAGAAAGATGCCAAAAATATGGTGCCAACTCAGAACTATGACTAA 1800 0.4511 MAMGAVSMGVNGWGDMKSLTLQVITGRWFVIFASFLIMAAAGATYMFGLYSGDIKETLGYDQTTLNLLSFFKDFGSNVGVLSGLINELTPPWVVLAIGAVLNFFGYFMIWLSVTRRIARPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILLIGWLPAAISFAFLRTIRYMKPVKQPNELKVFYNFLYISLGLAGFLLVMIIIQKRADFTQSEYGVSAGIVVFLLFLPLLVVSIEEHKIWHSKRLALVDPSPVKIVTEGEKVKQNETTNGNTSVTAISNDTKWWENVFSPPERGEDYTILQALFSADMLILFITCICGVGGTLTAIDNLNQIGSSLRYPKKSISTFVSLVSIWNYMGRVFSGFVSEHFLNKYKFPRPLMLSLTLLLSCVGHLLIAFDVPDGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKMTGYLYDREAKKQLAALGLERKEGEQLNCIGVDCFKLSFIIITAATFFGAIVSLILVARTRKFYSGDIYKRFQDAATVSETEMAGLENTGKPKKDAKNMVPTQNYD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6428g00007 599 CDD MFS_Mch1p_like 26 543 - -
Vium6428g00007 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 560 - -
Vium6428g00007 599 FunFam Nodulin family protein 338 559 - -
Vium6428g00007 599 Pfam Nodulin-like 27 271 IPR010658 -
Vium6428g00007 599 SUPERFAMILY MFS general substrate transporter 26 555 IPR036259 -
Vium6428g00007 599 Gene3D MFS general substrate transporter like domains 322 557 IPR036259 -
Vium6428g00007 599 MobiDBLite consensus disorder prediction 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6428g00007 Vium-Chr6428 53998 56006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6428g00007 14 567 Nodulin-like Gene Family AT2G39210 72.760 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6428g00007 - - pvu:PHAVU_007G024800g 1037.71