Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6424g00009 ATGCGGGTTGTAAATTGCTCCATTTCGTGGTCGTTTCGGTCAGCCGTCACTGCCGCTCTCCCCTCTTTCCCTTCTTCTAGATTCCCTCCGCTCCTCCCTTTCTCACTCCCTTCTTCCAACCCTCCGTCCACTGTCCTCCGCCGTTCCACTTCTTCCGCTAGACGAGTGACCAGAATGGCTCTGAAAAACGCTAAAGAGGAACAAGACCCGCGTTTGGAGAGAATCTCCTCTGCAATCCGAGTCATCCCTGATTTTCCCAAGCCAGGAATTTTGTTTCAGGACATAACCACGCTGCTTCTTGATCCCAAGGCTTTCAAAGACACCATCGATCTTTTTGTTGAGAGGTACAGAGATCAGAATATCAATGTTGTCGCAGGTGTTGAAGCAAGAGGTTTTATATTTGGTCCACCCATTGCATTAGCTATTGGAGCCAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCAGGGGAGGTTATATCAGAAGAGTATTCTTTGGAGTATGGAAAAGACAAAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGAACGGGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGAACGTTAGATGCTGCAATTAAGCTACTAGAACGTGTTGGGGTTCATATTGTGGAGTGTGCTTGTCTGATTGAATTACCAGAGCTGAAGGGGCGAGATAGGCTGGGAAACAAGCCGCTATTTGTCTTAGTGAAAGTGGCTGCATGA 735 0.4748 MRVVNCSISWSFRSAVTAALPSFPSSRFPPLLPFSLPSSNPPSTVLRRSTSSARRVTRMALKNAKEEQDPRLERISSAIRVIPDFPKPGILFQDITTLLLDPKAFKDTIDLFVERYRDQNINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGKDKMEMHVGAVQPGERALVIDDLIATGGTLDAAIKLLERVGVHIVECACLIELPELKGRDRLGNKPLFVLVKVAA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6424g00009 244 CDD PRTases_typeI 109 241 IPR000836 -
Vium6424g00009 244 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 63 241 - -
Vium6424g00009 244 SUPERFAMILY PRTase-like 77 238 IPR029057 -
Vium6424g00009 244 Gene3D - 62 243 IPR029057 -
Vium6424g00009 244 FunFam Adenine phosphoribosyltransferase 1 63 242 - -
Vium6424g00009 244 Hamap Adenine phosphoribosyltransferase [apt]. 75 242 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vium6424g00009 244 Pfam Phosphoribosyl transferase domain 102 230 IPR000836 -
Vium6424g00009 244 NCBIfam adenine phosphoribosyltransferase 76 241 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6424g00009 Vium-Chr6424 57781 64013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6424g00009 68 244 PRT Gene Family AT1G27450 81.356 1.06e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6424g00009 K00759 - gmx:100777103 340.887