Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6424g00001 ATGGCCGAACCAAGGGTTTTCACTCTCTCACAGGTTGCTCAGCACAGATCCAACAAAGACTGTTGGGTGGTGATCAATGGAAGAGTTTTGGATGTGACAAAGTTTTTGGAGGAACACCCGGGAGGGGAAGAGGTGGTTCTAGAAGTTGCTGGGAAGGAGGCGACGAAGCAATTTGATGCCATTGGACACAGCAAAGCAGCACAAAACATGGTACTAAAGTACCAGGTTGGTGTTCTCGAAGGTGCCAAGGTTGAAGAGGTAGACATGAACGATGATGTTGTTGACATGGAATCCAACAGCAAAGAGATGAGTGCCTTCGTCATCAAAGATGGTGCAAACTATAAGTCAACCTCATTTTACGAGTTCTTTGTTCCTCTTCTTGTTGCTGCTCTCTACTTTGGCTATCGATGCCTCACCGTCCCTCAATATTAG 432 0.463 MAEPRVFTLSQVAQHRSNKDCWVVINGRVLDVTKFLEEHPGGEEVVLEVAGKEATKQFDAIGHSKAAQNMVLKYQVGVLEGAKVEEVDMNDDVVDMESNSKEMSAFVIKDGANYKSTSFYEFFVPLLVAALYFGYRCLTVPQY 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6424g00001 143 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 84 IPR036400 -
Vium6424g00001 143 FunFam Cytochrome b5 type B 1 84 - -
Vium6424g00001 143 Gene3D - 2 85 IPR036400 -
Vium6424g00001 143 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Vium6424g00001 143 SMART Cyt_b5_2 7 80 IPR001199 -
Vium6424g00001 143 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Vium6424g00001 143 PANTHER CYTOCHROME B5 3 138 - -
Vium6424g00001 143 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Vium6424g00001 143 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Vium6424g00001 143 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Vium6424g00001 143 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Vium6424g00001 143 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6424g00001 Vium-Chr6424 1090 1753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6424g00001 5 139 NADPH P450 reductases AT5G48810 43.796 4.11e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6424g00001 - - gmx:113001935 223.016