Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6370g00019 ATGGTGAGAGTGGTTCCCATGGCTTCTTCGGTTCGACCCACTCTCTTCTCCCTTACCTTCTCTCCACCTTCCTCACTTCCTCTCTTCAATCCTTCTCCCCGTCTCTCCTTCTCTCTGTCTCGGTACCATAATTTTGGTCTGAAAGCTTCCAGATTGTTCAGACAAGATGGTTATCCCGTGAGAGTCATGGCATCAGGGGACGTGTCACAATCTGTAGCGGCTGCTTCACCAGAAAATGTGCTTGAGTGGGTCAAGCAGGACAAGAGAAGAATGCTTCACGTTGTGTATCGAGTTGGGGACTTGGACAGGACTATAAAGTTTTATACGGAGTGTCTGGGAATGAAGCTCCTCAGAAAGAGGGACATACCGGAGGAGAGATATACTAATGCCTTTCTTGGATATGGGCCTGAAGACTCACACTTTGTTATTGAACTGACATATAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCCGTTGATGATGTTGTAAAAGCAGTGGAGCTAATAAGAGCTAAGGGTGGTAAAATAACAAGAGAGCCTGGGCCTGTAAAGGGAGGCCGTTCAGTAATTGCATTTGTTGAAGACCCTGATGGTTATAAATTTGAACTTATAGAAAGAGGTCCAACTCCTGAACCCTTGTGCCAAGTAATGCTCCGAGTGGGTGATCTTAATCGTTCCATAGAATTTTATGAGAAGGCATTTGGTATGGAGTTGCTTCGTACTCGAGACAATCCAGAATACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGCACTGTTCTGGAGTTGACTTACAATTATGGGGTCACTGAATACGATAAAGGAAATGCTTATGCTCAGATTGCAGTAGGCACCGATGATGTGTACAAAACTGCAGAAGCAATTAAACTAGCTGGAGGGAAGGTTACTCGTGAACCTGGACCATTACCTGGTATCAACACCAAAATTACTGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTAAAGGAGTTGGAATAG 1059 0.4363 MVRVVPMASSVRPTLFSLTFSPPSSLPLFNPSPRLSFSLSRYHNFGLKASRLFRQDGYPVRVMASGDVSQSVAAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVVKAVELIRAKGGKITREPGPVKGGRSVIAFVEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAVGTDDVYKTAEAIKLAGGKVTREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6370g00019 352 CDD GlxI_Ni 91 212 - -
Vium6370g00019 352 ProSitePatterns Glyoxalase I signature 2. 157 169 IPR018146 GO:0004462|GO:0046872
Vium6370g00019 352 PANTHER LACTOYLGLUTATHIONE LYASE 70 352 - -
Vium6370g00019 352 FunFam Lactoylglutathione lyase 87 216 - -
Vium6370g00019 352 CDD GlxI_Ni 221 342 - -
Vium6370g00019 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 220 344 IPR037523 -
Vium6370g00019 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 90 214 IPR037523 -
Vium6370g00019 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 89 219 IPR029068 -
Vium6370g00019 352 Gene3D - 217 352 IPR029068 -
Vium6370g00019 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 223 338 IPR004360 -
Vium6370g00019 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 91 211 IPR004360 -
Vium6370g00019 352 Gene3D - 62 215 IPR029068 -
Vium6370g00019 352 FunFam Lactoylglutathione lyase 217 352 - -
Vium6370g00019 352 ProSitePatterns Glyoxalase I signature 1. 223 244 IPR018146 GO:0004462|GO:0046872
Vium6370g00019 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 221 342 IPR029068 -
Vium6370g00019 352 ProSitePatterns Glyoxalase I signature 1. 93 114 IPR018146 GO:0004462|GO:0046872
Vium6370g00019 352 NCBIfam lactoylglutathione lyase 90 215 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6370g00019 Vium-Chr6370 77722 82758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6370g00019 223 341 Calmodulin-binding Proteins AT1G08110 28.966 9.36e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6370g00019 K01759 - gmx:100780463 624.78