Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6362g00003 ATGGATTTCCAGCACAGTAATCTCAGACTACTGTGGAAAGAACCCACGGTTTTACCGTGGCTAAAAATCCTCAATCTTAGTCATTCAAAGTACTTGACAGAAACCCCTGACTTTTCAAAATTACCCAGTCTTGAAAAGCTCATTCTCAAGCATTGTGTGAGTTTGGGCAAGGTACACCAATCGATTGGAGATTTACACAATCTTCTACTAATAAATTTGAAAGGCTGTACAAACCTAAGCAATCTCCCAAGTGAGACATATAAGTTGAAATCCTTTAAAACTCTTATCCTATCTGGCTGTCTGAAGATTGATATCTTTAAAGAAGATATAATGCACATGAAATCCTTGAAAACTCTAATTTCTCACAATACTGCTGTGAAACAAGTTCCCATTTCAGTTGTAAGCTCAAAACGCATTGGATATATACATGTAGACGAAGGAAAGGGATTATCACGTACTGTTCTACATTCTATCATTTTGTCTTGGATGTCCCATACTTTTAATACCCTGTATCGTATGCGTCCGTTTCGTGGCATTTCACCATCTCTAGTTTCCATGAATGTGGAGCATAATGATTTGGTAGATCTAGCTCCAATCCTTAGAAGCATTTTAAATCTGCGTACTGTTTTAGTGCAATGTGTGACGGAGTATCCAATACTTCAACAAGTAACAGCTATTTTGGAAGAAGTCCGACAAGTTCGTCGTGTAAGTTGGACTACATCTACACAACTTTCCAACCATCCATTCAGTCCATATTCGATTCAATTTGGTGGTTATCAAAAAGAAGTCTTCAATACTCTCCGAAAAAGCATTTATGATGAGGAATTGGCAGCCAGACAGACTCGTAAAGTTTTTGTCCCTAGTGACAATTATCCTCATTGGTTGGCTTATAAGAATGAGGGACACTCAGTCAATTTCACCGTGCCTGACAATTTTCACATGGATGGAATGATTTTGTGCGTTGAGCATTTAGCACGCTTGGACGACCCAACTCAATATCTTAGTTGTGTCTTAATGGTTAATTACACAGAGTGCACAATCCAGTTATTCAATCGAGAAACACTAACTTCCTTGAATGATGTTGATTGGCAGGGCGTGATATCACATATGGGATGTGGAGACAAGTTGGAGATTTTTATTATTTTTGAGAAAGGATTTGAAGTCCAGAAGACAGCTGTCTATCTAGTGTGTAATGATCAATTGACAGAAGAAAGTCAATTTAACGAGCTCTAA 1233 0.3804 MDFQHSNLRLLWKEPTVLPWLKILNLSHSKYLTETPDFSKLPSLEKLILKHCVSLGKVHQSIGDLHNLLLINLKGCTNLSNLPSETYKLKSFKTLILSGCLKIDIFKEDIMHMKSLKTLISHNTAVKQVPISVVSSKRIGYIHVDEGKGLSRTVLHSIILSWMSHTFNTLYRMRPFRGISPSLVSMNVEHNDLVDLAPILRSILNLRTVLVQCVTEYPILQQVTAILEEVRQVRRVSWTTSTQLSNHPFSPYSIQFGGYQKEVFNTLRKSIYDEELAARQTRKVFVPSDNYPHWLAYKNEGHSVNFTVPDNFHMDGMILCVEHLARLDDPTQYLSCVLMVNYTECTIQLFNRETLTSLNDVDWQGVISHMGCGDKLEIFIIFEKGFEVQKTAVYLVCNDQLTEESQFNEL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6362g00003 410 Gene3D Ribonuclease Inhibitor 1 253 IPR032675 -
Vium6362g00003 410 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 6 181 - -
Vium6362g00003 410 SUPERFAMILY L domain-like 2 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6362g00003 Vium-Chr6362 29790 31726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6362g00003 18 133 WRKY Transcription Factor Family AT4G12020 33.621 1.82e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6362g00003 - - vum:124843015 831.247