Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6361g00003 ATGGCCACTTGTGTATCAACAATTGTTGCACCTTCTAATACTAGAAATTCAGCAAGGGTGTTTACTGTTGGAGGAAGAAATCTGAGGGTGAATTACCCTGGGAGAGCTCGTTGCATGAAAATGTATGACCGCAGGAATGGATTTTCTGGTGGCATCCAGGTGTCGGGTTTACTTGAAGTTAAGTGTTCAGCCAATTCTCACGGGGTCAGTCCATATAATAGCCAGGGACCTTTTCTTGATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGGGAGCAGTACAGTTAACAGCCCTAGAAAGGATAACTCACGTGAACATATATCCGAGAGCCCAGGAGCTATGTCTATTCAAAGTGATTACAATGAAGCAAAGATCAAAGTTATAGGCGTTGGAGGAGGTGGGTCTAATGCAGTCAATCGCATGATAGAGAGTTCGATGCATGGTGTGGAGTTTTGGATTATTAATACTGATGTTCAAGCCATGAGAATGTCACCTGTCTATCCTGAGAACCGTTTGCAAATTGGTCAAGAGCTTACGCGAGGTCTTGGCGCTGGTGGTAACCCCGAGACCGGAATGAATGCTGCTAAAGAAAGCAAAGAGTCTATAGAAGAGGCGGTCTATGGAGCCGATATGGTCTTTGTTACAGCTGGAATGGGTGGGGGAACTGGCACAGGTGGAGCTCCAATTATTGCCAGTATAGCAAAGTCAATGGGTGTACTGACGGTTGGTATTGTCACCACCCCTTTCTCATTTGAAGGAAGAAGGAGAGCTATTCAAGCCCAAGAAGGAATTACAGCCTTGAGAGATAGTGTGGACACACTTATAGTTATTCCAAATGACAAGCTACTAACAGCAGTTTCTCAGTCTACCCCTGTAAGTGAAGCATTCAATTTGGCAGATGATATTCTTCGACAGGGTGTTCGCGGCATATCTGATATTATTACGATACCAGGGTTGGTGAATGTAGATTTTGCTGATGTTCGAGCTATCATGGCCAATGCTGGTTCTTCACTAATGGGGATAGGAACTGCAACTGGAAAATCAAGGGCAAGAGATGCTGCGTTAAATGCCATCCAGTCACCTTTGCTGGATATTGGTATAGAGAGGGCAACTGGAATTGTTTGGAACATAACTGGGGGGACTGATCTGACCTTGTTTGAGGTAAACGCAGCAGCAGAGGTTATATATGATCTTGTAGACCCAACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCACCGGTCAAGTCAGCATAACATTGATTGCAACTGGATTCAAGCGTCAAGAGGAGGGTGAAGGGAGGCCCCCGCAGGCGACTCAACTCACTCAGGCAGATTCAAGCTTCGGATTTAATCGGAGATCCTCTTCTTTTAATGATGGTGGTTTGTTTGAGATACCTGAATTCCTAAAGAAGAAAGGAGGTTCACGATATCCAAGGGCTTGA 1455 0.4467 MATCVSTIVAPSNTRNSARVFTVGGRNLRVNYPGRARCMKMYDRRNGFSGGIQVSGLLEVKCSANSHGVSPYNSQGPFLDLHPEVSMLRGEGSSTVNSPRKDNSREHISESPGAMSIQSDYNEAKIKVIGVGGGGSNAVNRMIESSMHGVEFWIINTDVQAMRMSPVYPENRLQIGQELTRGLGAGGNPETGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIASIAKSMGVLTVGIVTTPFSFEGRRRAIQAQEGITALRDSVDTLIVIPNDKLLTAVSQSTPVSEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLTGQVSITLIATGFKRQEEGEGRPPQATQLTQADSSFGFNRRSSSFNDGGLFEIPEFLKKKGGSRYPRA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6361g00003 484 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 98 441 IPR045061 GO:0003924|GO:0005525
Vium6361g00003 484 SMART Tubulin_4 125 319 IPR003008 GO:0005525
Vium6361g00003 484 Gene3D - 335 443 IPR037103 -
Vium6361g00003 484 CDD FtsZ_type1 136 428 IPR000158 GO:0003924|GO:0005525
Vium6361g00003 484 NCBIfam cell division protein FtsZ 116 440 IPR000158 GO:0003924|GO:0005525
Vium6361g00003 484 Hamap Cell division protein FtsZ [ftsZ]. 121 437 IPR000158 GO:0003924|GO:0005525
Vium6361g00003 484 MobiDBLite consensus disorder prediction 439 462 - -
Vium6361g00003 484 FunFam Cell division protein FtsZ 116 334 - -
Vium6361g00003 484 PRINTS Cell division protein FtsZ signature 303 325 IPR003008 GO:0005525
Vium6361g00003 484 PRINTS Cell division protein FtsZ signature 212 232 IPR003008 GO:0005525
Vium6361g00003 484 PRINTS Cell division protein FtsZ signature 326 347 IPR003008 GO:0005525
Vium6361g00003 484 PRINTS Cell division protein FtsZ signature 240 261 IPR003008 GO:0005525
Vium6361g00003 484 ProSitePatterns FtsZ protein signature 2. 211 232 IPR020805 GO:0005525
Vium6361g00003 484 SUPERFAMILY Tubulin C-terminal domain-like 318 432 IPR008280 -
Vium6361g00003 484 Gene3D Tubulin/FtsZ, GTPase domain 115 334 IPR036525 -
Vium6361g00003 484 SMART Tubulin_C_4 321 438 IPR018316 -
Vium6361g00003 484 SUPERFAMILY Tubulin nucleotide-binding domain-like 124 322 IPR036525 -
Vium6361g00003 484 MobiDBLite consensus disorder prediction 432 465 - -
Vium6361g00003 484 Pfam FtsZ family, C-terminal domain 336 430 IPR024757 -
Vium6361g00003 484 Pfam Tubulin/FtsZ family, GTPase domain 125 286 IPR003008 GO:0005525
Vium6361g00003 484 FunFam Cell division protein ftsZ, putative 335 443 - -
Vium6361g00003 484 MobiDBLite consensus disorder prediction 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6361g00003 Vium-Chr6361 84153 91999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6361g00003 215 423 PP2C-type Phosphatase Gene Family AT1G75010 23.288 6.02e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6361g00003 K03531 - gmx:100784356 839.721