Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6343g00002 ATGGGAGATGAGACTCAACAATCAGAGCAGAAGCAAAAGTTCAGTATGGCTCTGTTATATTATGGTTTCGTGGTAGTACTTTTTCTCTATTCTCTTAAGGTCTTGTTTGGATCTAGAAAATTCAGAAACCTTCCTCCAGGGCCTTTTGCTTACCCTATAGTAGGAAACCTCTTGCAACTCGAACAGCCTTTTCACCGTTATTTCACTCGATTGTCCAAAAAACATGGCAAAGTCTTCTCTCTATGGTTCGGCAACCGTCTCGTTATCGTTGCTTCTGACCTACCCGTGGTGCAAGAATGCTTCACCAAAAACGACACCGTCTTGGCTAACCGACCCCACTTTCTCCTTGGCAAACACATCAGTTACAACAACAGCACCATCCTTCACTCCTGTTACGGTGAACATTGGCGCCATCTCCGCCGCATCTTGTCCCTCGAGGTTGTCTCAACACACCGTTTGAATGCCTCCTACGAAATCCGAAGGGACGAACTCACCAAACTCTTGCAGAAACTTGCTCGCTTCTCGCGCAACGACTTCACTAAAGTCGATCTCAAATCCATGGTCATGGAAACATCACTTAATACTATGATGAGGCTCGTGTCGGGAAAGAGATTCTACGGTGATGACTGTGATGTGAGTGATGTGGAGAAGGCCAAAGAATTTAGAGGTATCCTTAGAGAGATGGTGTCGTTAGCAGGAGTAAATAACCGTGGAGACTTCTTGCCTTTCTTGAGGTGGTTTGATTTAGATAATTTGGAAAAGAGACTAAAGAACATTGGGAAGAGAATCGATGCATTCTTACAATCACTCATTGACGAAATTCGTGCTTCAAATAAGACTACCAATACTATGATATCTCAGCTCTTAGTTCAACAACGAACACAACCTGAACAATACAGCGATCAAATTATCAAAGGACTTTGCATGAGTATGTTACTTGCAGGAACAGATACATCAGCTTTGACTTTAGAATGGGGAATGGCTAATTTATTGAACCATCCAGAAGTTTTAAAGAGAGCAAAAGAAGAGCTAGACACTCACGTGGGATCAGATCGTCTGGTAGATGAATCAGATATGTCAAAACTTCCTTATGTTCTAAACATCTTTTTCGAGACGATAAGATTGCATCCTGCTGCACCACTTTGGTCACCACATATGTCTTCAGAAGATTGTACCATCGGAGGATATAATCTCCCAAAAAATACAATTCTGTTGGTTAATGCATGGTCCATTCATCACGATCCAACTTTGTGGAAAAACCCATATGAATTTAGGCCTGAAAGGTTTGAGAAGGAATGTGACTCAAGCAGTTTGCTTTCATTTGGATTAGGGAGGAGGTCTTGTCCTGGAAACAACTTGGCTCAACGTACTGTGGGATTAGCTTTGGCTTCATTGATTCAATGTTTTGAGTGGCAACGAATCGGTAAGGAAGAAATTGATATGACTGAAGCAAAGGGAATCACTATATCAAGGCAAAACCCATTGGAAGTTATGTGCAAAGCTCGTCAAATCCCAGCTATTACGGATCTGTATTGA 1536 0.4206 MGDETQQSEQKQKFSMALLYYGFVVVLFLYSLKVLFGSRKFRNLPPGPFAYPIVGNLLQLEQPFHRYFTRLSKKHGKVFSLWFGNRLVIVASDLPVVQECFTKNDTVLANRPHFLLGKHISYNNSTILHSCYGEHWRHLRRILSLEVVSTHRLNASYEIRRDELTKLLQKLARFSRNDFTKVDLKSMVMETSLNTMMRLVSGKRFYGDDCDVSDVEKAKEFRGILREMVSLAGVNNRGDFLPFLRWFDLDNLEKRLKNIGKRIDAFLQSLIDEIRASNKTTNTMISQLLVQQRTQPEQYSDQIIKGLCMSMLLAGTDTSALTLEWGMANLLNHPEVLKRAKEELDTHVGSDRLVDESDMSKLPYVLNIFFETIRLHPAAPLWSPHMSSEDCTIGGYNLPKNTILLVNAWSIHHDPTLWKNPYEFRPERFEKECDSSSLLSFGLGRRSCPGNNLAQRTVGLALASLIQCFEWQRIGKEEIDMTEAKGITISRQNPLEVMCKARQIPAITDLY 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6343g00002 511 PANTHER CYTOCHROME P450 82C3-RELATED 24 502 - -
Vium6343g00002 511 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 FunFam Cytochrome P450 family protein 36 505 - -
Vium6343g00002 511 Pfam Cytochrome P450 45 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vium6343g00002 511 CDD CYP81 76 495 - -
Vium6343g00002 511 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 SUPERFAMILY Cytochrome P450 45 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6343g00002 511 Coils Coil 249 269 - -
Vium6343g00002 511 Gene3D Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6343g00002 Vium-Chr6343 33327 35446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6343g00002 23 511 Cytochrome P450 AT4G37370 49.290 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6343g00002 K13260 - gmx:100811727 669.463