Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6332g00001 ATGCATTCTTCACTTATTGATCATCTCCTCCAACAACCCTTTCTCTCTCTCCCAAAAATGGTGACACTTTCTTTCTATGATCGCCTTACCTTCACTGCCTTGGCCCTCTTCATAGCTGGCCTGATTTTCTTCCTCACTCGCAGAACCAAATCCAAGAAGTTGAACCTTCCCCCAGGACCCCCCGGATGGCCTATTGTGGGGAACCTTTTTCAAGTTGCTCGTTCTGGGAAGCCCTTCTTTGAGTATGTGAACGACGTGAGGCTCAAATATGGCTCAATCTTCACCCTCAAGATGGGGACGAGGACCATGATCATCCTCACCGATGCAAAGCTGGTCCACGAGGCCATGATTCAAAAGGGGGCAACATATGCCACCAGGCCTCCTGAGAACCCCACCAGAACCATCTTTAGTGAGAACAAGTTCACCGTGAATGCGGCAGTGTATGGCCCTGTTTGGAAGTCACTCAGGAGGAACATGGTGCAGAACATGCTGAGCTCCACCAGGCTCAAGGAGTTTCGCACTGTGAGGGACAACGCAATGGACAAGCTCATCAACAGGCTGAAGGCTGAAGGTGAGAGCAACGGCGGGGTGGTTTGGGTGCTCAAAGATGCCAGGTTTGCTGTGTTTTGCATACTTGTGGCTATGTGTTTTGGTCTAGAGATGGATGAGAAAACAGTGGAGAGAATAGACCAGGTTATGAAGAATGTTCTAATCACATTGGATCCCAGAATCGATGACTATCTTCCAATCCTAAGTCTCTTTTTCTCAAAGCAAAGAAAGAGAGCATTGGAGGTGCGTAAAGAACAGGTTGAGTTTATAGCCCCCATCATTGAGCAGAGAAGGAGGGCAATCCAAAACCCAGGGTCAGATCACACTGCGACAACATTTTCCTACCTTGACACACTCTTTGATCTGAAAATTGATGGGAAGAAATCAGCACCCTCGGATGCTGAATTAGTGTCACTGTGCTCAGAGTTTCTGAATGGAGGCACGGACACAACAGCCACAGCGGTTGAGTGGGGCATAGCACAGCTCATAGCGAATCCTGAGGTTCAGACAAAGCTGTATGAAGAAATTAAGAGGACGGTGGGAGAAAAGAAGGTTGATGAAAAGGACGTTGAGAAAATGCCTTACCTACATGCTGTGGTGAAGGAACTCCTTAGGAAGCACCCTCCAACACACTTCGTGCTCACACATGCTGTCACTGAGCCTACCACTCTGGGAGGGTATGACATACCCATTGATGCAAATGTTGAGGTGTACACTCCGGCCATTGGTGAGGACCCCAAATATTGGTCCAACCCTGAGAAATTTGACCCTGACAGGTTCATCTCTGGGGGAGAGGAAGCAGACATAACTGGGGTAACTGGCGTGAAGATGATTCCATTTGGGGTTGGGAGAAGGATATGCCCTGGCTTGGGAATGGCCACAGTTCATATTCACCTCATGATGGCTAGGATGGTGCAGGAGTTTGAGTGGGGTGCTTACCCTCCAGAGAAGAAGTTGGATTTCAGTGGCAAGTGGGAGTTCACTGTGGTCATGAAAGAATCTCTAAGAGCAATCATCAAACCGAGAGAAAAGCTGCAGTTGTAA 1593 0.4846 MHSSLIDHLLQQPFLSLPKMVTLSFYDRLTFTALALFIAGLIFFLTRRTKSKKLNLPPGPPGWPIVGNLFQVARSGKPFFEYVNDVRLKYGSIFTLKMGTRTMIILTDAKLVHEAMIQKGATYATRPPENPTRTIFSENKFTVNAAVYGPVWKSLRRNMVQNMLSSTRLKEFRTVRDNAMDKLINRLKAEGESNGGVVWVLKDARFAVFCILVAMCFGLEMDEKTVERIDQVMKNVLITLDPRIDDYLPILSLFFSKQRKRALEVRKEQVEFIAPIIEQRRRAIQNPGSDHTATTFSYLDTLFDLKIDGKKSAPSDAELVSLCSEFLNGGTDTTATAVEWGIAQLIANPEVQTKLYEEIKRTVGEKKVDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTPAIGEDPKYWSNPEKFDPDRFISGGEEADITGVTGVKMIPFGVGRRICPGLGMATVHIHLMMARMVQEFEWGAYPPEKKLDFSGKWEFTVVMKESLRAIIKPREKLQL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6332g00001 530 SUPERFAMILY Cytochrome P450 57 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vium6332g00001 530 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 Pfam Cytochrome P450 57 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 CDD CYP77_89 89 519 - -
Vium6332g00001 530 FunFam Cytochrome P450 family protein 50 527 - -
Vium6332g00001 530 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 35 514 - -
Vium6332g00001 530 Gene3D Cytochrome P450 49 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6332g00001 530 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6332g00001 Vium-Chr6332 2709 4765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6332g00001 46 525 Cytochrome P450 AT3G10570 70.894 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6332g00001 K21995 - gmx:100795510 942.954