Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium631g00001 ATGTCGCAGCAATCTTGTTCGGCGGACCAACTAGCCCAACTTTTTGGCCCAAACACAACCAACGCCCAAGCGGCGGCCACGCTAATCTGCGACCAGTTCGCCGCCGTGGTTAGGAATTTCACCGACACAGGCTACGCCATTGACAACACCTACCTCCTCTTCTCCGCCTACCTCGTGTTCTCCATGCAGCTTGGCTTCGCCATGCTCTGCGCCGGCTCGGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTGCTCGACGCCGCTGCCGGCGGTATCTTCTACTACCTCTTCGGCTTTGCCTTCGCCTGGGGCTCCCCTTCCAACGGCTTCATCGGGAAACACTACTTCGGCCTCACAGACCTCCACTCCGACAATTTAGACTACAGCAACTTCCTTTACCAGTGGGCCTTCGCCATCGCCGCTGCCGGCATCACCAGCGGCTCCATCGCCGAGCGAACCCAGTTTGTCGCGTACCTAATCTACTCCTCCTTCCTCACCGGCTTCGTCTATCCGGTAGTCTCTCACTGGTTCTGGTCCCCTGACGGTTGGGCATCCGCGTTCAAGAAAAGCGATCTTTTATTATCCACCGGCGTAATCGACTTCGCCGGCTCCGGCGTTGTCCACATGGTCGGCGGTGTGGCAGGACTCTGGGGCGCCCTTATCGAGGGTCCACGAATCGGCCGATTTGATCACGCGGGACGCGCGGTGGCCTTACGTGGCCACAGCGCCTCGTTAGTCGTGCTCGGAACCTTCATGCTGTGGTTCGGTTGGTACGGTTTCAACCCTGGTTCATTCAACAAAATCTTAGTCGCTTATGACTCGGGGAACAAGTATGGTCAATGGAGCGCGGTTGGAAGAACCGCGGTTACCACAACTCTAGCGGGGTCAACGGCTGCGTTGACCACGCTCTTCGGGAAACGCCTGATATCCGGACATTGGAACGTCACCGATGTCTGCAACGGTTTGCTGGGAGGGTTCGCCGCCATAACAGCCGGTTGTTCTGTGGTGGAGCCGTGGGCGGCTATCGTGTGTGGTTTTGTGGCATCCCTTGTTCTGATCGCGTGTAACAAACTGGCGGAGATGGCTAGGTTTGACGATCCTTTAGAGGCGGCGCAGTTGCACGGAGGGTGTGGCGCGTGGGGGGTGCTTTTCACGGCGCTGTTCGCTAAGAAGGAGTACGTGTTGCAGGTTTACCAGGGAGATCAGTCGAGGCCGCACGGGTTGTTTATGGGTGGTGGATGGAATTTGTTGGGGGCGCACGTGATTCAGATTTTGGTGATTGTTGGATGGGTTAGTGCGACGATGGGGCCACTCTTCTGGGGGCTTAAAAAGTTGAAGCTTTTGAGGATTTCGTCGGAGGATGAACTGGCGGGTATGGATCTGACCCGGCATGGAGGGTTTGCCTACGCCTACGAAGATGATGAGACTCAGAAGCATGGGATTCAGTTGAGGAAGGTCGAACCCAACGCCTCTACCCCAACCACTGATGGGGGATTATGA 1509 0.5693 MSQQSCSADQLAQLFGPNTTNAQAAATLICDQFAAVVRNFTDTGYAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGIFYYLFGFAFAWGSPSNGFIGKHYFGLTDLHSDNLDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASAFKKSDLLLSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVAYDSGNKYGQWSAVGRTAVTTTLAGSTAALTTLFGKRLISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASLVLIACNKLAEMARFDDPLEAAQLHGGCGAWGVLFTALFAKKEYVLQVYQGDQSRPHGLFMGGGWNLLGAHVIQILVIVGWVSATMGPLFWGLKKLKLLRISSEDELAGMDLTRHGGFAYAYEDDETQKHGIQLRKVEPNASTPTTDGGL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium631g00001 502 Gene3D Ammonium transporter AmtB like domains 26 491 IPR029020 -
Vium631g00001 502 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vium631g00001 502 PANTHER AMMONIUM TRANSPORTER 22 475 - -
Vium631g00001 502 NCBIfam ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vium631g00001 502 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Vium631g00001 502 FunFam Ammonium transporter 29 486 - -
Vium631g00001 502 SUPERFAMILY Ammonium transporter 46 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium631g00001 Vium-Chr631 14967 16914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium631g00001 4 497 Inorganic Solute Cotransporters AT4G13510 79.596 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium631g00001 K03320 - gmx:100818774 863.603