Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6288g00005 ATGGCAGTGGAAGAAGAGCTAACGAAAACGAAGGCCTTCATACGCCATGTTATCACTGGTCGTTGGTTCATGATCTTTGCCTCATGTCTCATCATGGCAGTTTCAGGGGCAACATACATGTTTGGTTTGTACTCCAACGAGGTAAAAACCTCGTTGGGGTATGACCAATCCACGCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCTGGGTTGATCAATGAGGTAAGCCCCCCTTGGGTTATACTAGCCATGGGAGCCACTATGAACTTTGTGGGCTACTTCATGATATGGCTCTCTGTCACTTCACGGATTGCCAAACCCCAACTGTGGCAAATGTGTCTCTACTTTTACATTGGTGCTAATTCTCAGTCCTTCGCTAACACTGGTGCTTTGGTGAACTGTGTCCAAAGCTTCCCAAGAAGCCGTGGAAGTGTGATTGGTCTTCTAAAGGGTTATGTAGGTCTAAGTGGAGCTATTTTCACTCAGCTATACCATTCCTTATATGGTGACAACTCCAAAACTCTTATATTCCTCATTGGGTGGCTTCCTGCTGCTGTTTCCTTCATTTTCCTTCCAACAGTTAGGGTGTTGAGTATAACCCCACAACCCAGAGAGATCAAGGTTTTTTACCAACTTCTTTATATTTCACTTGGGGTTGCAGGGTTTCTCATGGTGTTGATAATTATACAAAACAGGTTGAGTTTCACAAGGGTTGAGTACATAGTGGATGGCATTGTGGTTCTTTTCTTGCTTCTTCTCCCACTTGGTATTGTGTTCAAAGAAGAGTTCAGACTTTGGAAGAACCAGAGCCAGAACCAGAACCAAACCGTCCCTGATCATGCAGATGCTGTTGCTACTGCTTCTGCCTCAGTTATTGAATTGCCACAGCCAGAAGAAGCACATGCTGCTGCCTCTTCTCATCTGGAAGGGAAAAGCAGCTCATGTTTAAAGAACGTTTTCAAACCTCCAAAAAGGGGTGAGGACTACACCATCTTCCAAGCTATTTTCAGCATTGACATGTTGATTCTGTTCATTGCATCAGTGTTTGGTGTGGGAGGAACATTGACGGCTCTTGACAATCTGGGACAGATTGGAAAGTCATTGGGATACCCGAAAAAGAGCCTCACAACTTTTGTGTCTCTTGTGAGTATATGGAATTATCTAGGAAGAGCATCTTCTGGGTTTGCCTCAGAATTTTTGTTAGCCAAATACAAATTCCCTCGTCCCTTGCTCCTCACTCTAGTCATGCTTCTCTCCTGTGTTGGCCATATTCTAATCGCTTTTGGTATCCCAAACTCACTTTATTTCTCTTCAGTGATTATTGGGTATTGCTTTGGGGCCATGTGGCCCTTGATGTTTGCCATCATATCTGAAATATTCGGCCTCAAATACTACTCAACTTTATACAATTTAGGTGCTGTGGCAAGCCCTGTTGGAGCTTACATTCTGAATGTGAAAGTCACTGGTTTTTTGTATGATAAAGAGGCTTTGAAGCAGTTGAAGATGAAGGGACTCACAAGGCAAAAGGGAAAGGACTTAACTTGCTTGGGAGTTCAATGCTATAAGATGCCTTTCATCATAATCACTGCTTCAACCTTGGTTGGATGCTTTGTTTCCTTCATTCTAGTCTTAAGGACCAGAAAATTTTACAAAGGTGACATTTATCAAAAGTTCAGAGTTGAACCAGACACACCACAGAATCTTCCAACTTTTGCCACCACCACCACCACCACAAACTTCTCTCAAGAACCAGATAAAATCAACACCAAATAA 1794 0.4298 MAVEEELTKTKAFIRHVITGRWFMIFASCLIMAVSGATYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEVSPPWVILAMGATMNFVGYFMIWLSVTSRIAKPQLWQMCLYFYIGANSQSFANTGALVNCVQSFPRSRGSVIGLLKGYVGLSGAIFTQLYHSLYGDNSKTLIFLIGWLPAAVSFIFLPTVRVLSITPQPREIKVFYQLLYISLGVAGFLMVLIIIQNRLSFTRVEYIVDGIVVLFLLLLPLGIVFKEEFRLWKNQSQNQNQTVPDHADAVATASASVIELPQPEEAHAAASSHLEGKSSSCLKNVFKPPKRGEDYTIFQAIFSIDMLILFIASVFGVGGTLTALDNLGQIGKSLGYPKKSLTTFVSLVSIWNYLGRASSGFASEFLLAKYKFPRPLLLTLVMLLSCVGHILIAFGIPNSLYFSSVIIGYCFGAMWPLMFAIISEIFGLKYYSTLYNLGAVASPVGAYILNVKVTGFLYDKEALKQLKMKGLTRQKGKDLTCLGVQCYKMPFIIITASTLVGCFVSFILVLRTRKFYKGDIYQKFRVEPDTPQNLPTFATTTTTTNFSQEPDKINTK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6288g00005 597 Pfam Nodulin-like 21 265 IPR010658 -
Vium6288g00005 597 MobiDBLite consensus disorder prediction 576 597 - -
Vium6288g00005 597 SUPERFAMILY MFS general substrate transporter 21 558 IPR036259 -
Vium6288g00005 597 CDD MFS_Mch1p_like 20 543 - -
Vium6288g00005 597 Gene3D MFS general substrate transporter like domains 342 557 IPR036259 -
Vium6288g00005 597 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6288g00005 Vium-Chr6288 76606 79212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6288g00005 11 566 Nodulin-like Gene Family AT2G39210 60.924 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6288g00005 - - gmx:100814000 963.755