Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6283g00001 ATGAGAGTGCAGAGCAAGCAAGAAACGTTTGCATGGTATGAGGAATGTAGGGAATTGGTAAGGGTGAAAGCCAAAAACCTAGAAAAGGAGCAGCCGAGATGCTTGGTTGATGGAAATGAACTGCTCAGATTTCATGGCACAACACTTGCATGTTCACTTGGTTCAAACGCTTCCTCTTCTACCCTTTGCACTTTAGACCACTGTGGTGTCTGTCAAATTCTGAAGCATGGTTTTTACTCCAACCAAGAACTATTTAATGGTGCACTTGGGGTTTGCACCTCTTCTAGCAGTGCAAAAGCTATTCATTCAATTTGCTCACCCAATAACAAATCTGTGACGAGAAAATGTGTTATGCTGTGCAGAGTGATAGCTGGGAGAATCCATAATCCTCTACAAGAGATTGAGGAAATCACTCATACTGGGTTTGATTCTTTGGTAAAGAAAATGAGAGACCACTCAGAGATTGAAGAACTCGTTGTGTTAAATCCTAGAGCTGTGCTCCCTTGCTTTTTGTGGATGGCGAAATGGATAGTGTTTGCGCTTTGGATTCGCCTCTTGAATAAGGGGTTCTACTTCTTAGTTTTCTCTACGGCTTCTGATTTCTCGCTGGGAAAGGTCTTGGGGTGGATGATGATGATTGGGGTTGAAAATCTGGGTTGTTAG 663 0.4284 MRVQSKQETFAWYEECRELVRVKAKNLEKEQPRCLVDGNELLRFHGTTLACSLGSNASSSTLCTLDHCGVCQILKHGFYSNQELFNGALGVCTSSSSAKAIHSICSPNNKSVTRKCVMLCRVIAGRIHNPLQEIEEITHTGFDSLVKKMRDHSEIEELVVLNPRAVLPCFLWMAKWIVFALWIRLLNKGFYFLVFSTASDFSLGKVLGWMMMIGVENLGC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6283g00001 220 Gene3D - 1 175 - -
Vium6283g00001 220 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 172 - -
Vium6283g00001 220 SUPERFAMILY ADP-ribosylation 21 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6283g00001 Vium-Chr6283 984 7249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6283g00001 1 175 C2H2 Transcription Factor Family AT5G54630 47.541 2.45e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6283g00001 - - vum:124842819 455.677