Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6255g00002 ATGGAAGTCCCCAAATCCCCTTCCAAATGCAAACGAATCGCCAAACACAAATGGCTTATAAAATTCGGTTTAGTAATTTTGGTGATGCTGCTATTATTTCTAGGTTTTTATCTTGAGTCAGAAACTGGAAAACTCAACGCGTCGTCGTATTACACCGTGGTTGTGGATTGTGGAAGCACTGGGACACGGGTGAATGTGTATGAGTGGATGGTAGGGGTGAAAGGAGCAAGCAAAGGGAACTTGCCAGTGTTGCTGCACTCCTATCCTGATAATACAACCAGGAGGAGTTCACTTTGGAAAGGTTCTTGTCAATATCACTGTATGCAAACTGAACCCGGGTTACACAACTTTGTTAATGATTCTTTAGGAGTGAGACAGGCTTTGGAGCCCTTGATTGTGTGGGCGGAGCAAGTGGTGCCGCGAGAAATGCGCGGCAGTACTCCTGCTTTTGTCTTGGCTACTGCTGGGTTGAGGGGGCTCACCTTGGAGGACGCTGATAGGGTATTGGGAGATATTGAGGCTGTTGTGAAAGGCCATAGCTTTATGATGAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAAGGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTACAAAATGGGCACCTTTGATGATAACTATCCCAAGTCTCCCACTTTGGGACTTGTTGATATTGGGGGCTCGTCGTTGCAGATTGTGGCAGAGATAGATGTTGCTGTTGATGATGTGCATGTGATGAAATCAAGGCTCGGATCAACGGAGCATCGGATTGTGGCATATTCATTGCCTGCGTTTGGCCTAAATGAAGCGTTTGATAGGACAGTTCTTAGGCTCAGAAACAATCAAAGTGAGGAAAGAACTGCCAGTATCTCTGACCTCAGACATCCTTGTCTGTTATCAACTTATGTACAAAACTATACATGCCATTCTTGCTCTGCATTGGCTTCCATTTATGAGAAAAAACACAGTCAAGACCAGGAAAGTGAGCTTTATTCTTTACGTCTTACTGGAGAACCTAATTGGGAGCAATGCCTAGAACTAGCTATTGGTGCCGCCATGAACTCTAGTTCCAAAGTGTCACATCTGACAGTTAGCAAAAATTGCCAAGCTAGTTTATTTTCTGGTACTGGCACTGATATACTTAATTTAACAGCTGTTGCACAACCAGCCAAGTTTCATGCATTGTCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAGCCCAAGAACCAACTTAACAATGGTTTGGGAATCAGGCAAACAAATATGTTCAAATTTATGGTCTGGTTTGAGCAGTGTTTCTGGTAATCCAGATTATGCTGGACTGTTTTGTTTCCAGGTGGCTTATATGGCATCATTGATTGATTATGGTCTCTGTCTTGGGGATGTTGAAATGGTATTTGGCCCAGGTGACATTTCGTGGACTTTAGGAGCTGCATTAATTGAAGGGAAATTTTTGTGGTTAAACAGTACAAGCTACGAAGTCCATGTTATTATTTCAACTTTAAAGAATGTCAAGGTCACGTCTTCTCCTACTGTTCTATTTGCTGTACTCGTATTACTTTCATTGATTGTTTATTGTAGTCAAATTAAGCTACCAATGCCAAGTAGAAGGGATTCTGCTCCTGGCTCATCTTTGCCATCTTATACTCCTGTAAGACGTCGATCTAACTAA 1680 0.4262 MEVPKSPSKCKRIAKHKWLIKFGLVILVMLLLFLGFYLESETGKLNASSYYTVVVDCGSTGTRVNVYEWMVGVKGASKGNLPVLLHSYPDNTTRRSSLWKGSCQYHCMQTEPGLHNFVNDSLGVRQALEPLIVWAEQVVPREMRGSTPAFVLATAGLRGLTLEDADRVLGDIEAVVKGHSFMMSKSWIRVLSGKEEAYYGWVALNYKMGTFDDNYPKSPTLGLVDIGGSSLQIVAEIDVAVDDVHVMKSRLGSTEHRIVAYSLPAFGLNEAFDRTVLRLRNNQSEERTASISDLRHPCLLSTYVQNYTCHSCSALASIYEKKHSQDQESELYSLRLTGEPNWEQCLELAIGAAMNSSSKVSHLTVSKNCQASLFSGTGTDILNLTAVAQPAKFHALSGFFFVYNKLNLSPRTNLTMVWESGKQICSNLWSGLSSVSGNPDYAGLFCFQVAYMASLIDYGLCLGDVEMVFGPGDISWTLGAALIEGKFLWLNSTSYEVHVIISTLKNVKVTSSPTVLFAVLVLLSLIVYCSQIKLPMPSRRDSAPGSSLPSYTPVRRRSN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6255g00002 559 Gene3D Exopolyphosphatase. Domain 2 193 468 - -
Vium6255g00002 559 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 485 IPR000407 GO:0016787
Vium6255g00002 559 Pfam GDA1/CD39 (nucleoside phosphatase) family 46 484 IPR000407 GO:0016787
Vium6255g00002 559 MobiDBLite consensus disorder prediction 543 559 - -
Vium6255g00002 559 MobiDBLite consensus disorder prediction 536 559 - -
Vium6255g00002 559 Gene3D - 39 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6255g00002 Vium-Chr6255 37067 39591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6255g00002 19 488 Nodulin-like Gene Family AT4G19180 35.185 1.93e-85 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6255g00002 - - vun:114175521 1025.77