Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6255g00001 ATGGAAGTCCCCAAATCCCCTTCCAAATGCAAACGAATCGCCAAACACAAATGGCTTATAAAATTCGGTTTAGTAATTTTGGTGATGCTGCTATTATTTCTAGGTTTTTATCTTGAGTCAGAAACTGGAAAACTCAACGCGTCGTCGTATTACACCGTGGTTGTGGATTGTGGAAGCACTGGGACACGGGTGAATGTGTATGAGTGGATGGTAGGGGTGAAAGGAGCAAGCAAAGGGAACTTGCCAGTGTTGCTGCACTCCTATCCTGATAATACAACCAGGAGGAGTTCACTTTGGAAAGGTTCTTGTCAATATCACTGTATGCAAACTGAACCCGGGTTACACAACTTTGTTAATGATTCTTTAGGAGTGAGACAGGCTTTGGAGCCCTTGATTGTGTGGGCGGAGCAAGTGGTGCCGCGAGAAATGCGCGGCAGTACTCCTGCTTTTGTCTTGGCTACTGCTGGGTTGAGGGGGCTCACCTTGGAGGACGCTGATAGGGTATTGGGAGATATTGAGGCTGTTGTGAAAGGCCATAGCTTTATGATGAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAAGGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTACAAAATGGGCACCTTTGATGATAACTATCCCAAGTCTCCCACTTTGGGACTTGTTGATATTGGGGGCTCGTCGTTGCAGATTGTGGCAGAGATAGATGTTGCTGTTGATGATGTGCATGTGATGAAATCAAGGCTCGGATCAACGGAGCATCGGATTGTGGCATATTCATTGCCTGCGTTTGGCCTAAATGAAGCGTTTGATAGGACAGTTCTTAGGCTCAGAAACAATCAAAGTGAGGAAAGAACTGCCAGTATCTCTGACCTCAGACATCCTTGTCTGTTATCAACTTATGTACAAAACTATACATGCCATTCTTGCTCTGCATTGGCTTCCATTTATGAGAAAAAACACAGTCAAGACCAGGAAAGTGAGCTTTATTCTTTACGTCTTACTGGAGAACCTAATTGGGAGCAATGCCTAGAACTAGCTATTGGTGCCGCCATGAACTCTAGTTCCAAAGTGTCACATCTGACAGTTAGCAAAAATTGCCAAGCTAGTTTATTTTCTGGCACTGATATACTTAATTTAACAGCTGTTGCACAACCAGCCAAGTTTCATGCATTGTCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAGCCCAAGAACCAACTTAACAATGGTTTGGGAATCAGGCAAACAAATATGTTCAAATTTATGGTCTGGTTTGAGCAGTGTTTCTGGTAATCCAGATTATGCTGGACTGTTTTGTTTCCAGGTGGCTTATATGGCATCATTGATTGATTATGGTCTCTGTCTTGGGGATGTTGAAATGGTATTTGGCCCAGGTGACATTTCGTGGACTTTAGGAGCTGCATTAATTGAAGGGAAATTTTTGTGGTTAAACAGTACAAGCTACGAAGTCCATGTTATTATTTCAACTTTAAAGAATGTCAAGGTCACGTCTTCTCCTACTGTTCTATTTGCTGTACTCGTATTACTTTCATTGATTGTTTATTGTAGTCAAATTAAGCTACCAATGCCAAGTAGAAGGGATTCTGCTCCTGGCTCATCTTTGCCATCTTATACTCCTGTAAGACGTCGATCTAACTAA 1674 0.4259 MEVPKSPSKCKRIAKHKWLIKFGLVILVMLLLFLGFYLESETGKLNASSYYTVVVDCGSTGTRVNVYEWMVGVKGASKGNLPVLLHSYPDNTTRRSSLWKGSCQYHCMQTEPGLHNFVNDSLGVRQALEPLIVWAEQVVPREMRGSTPAFVLATAGLRGLTLEDADRVLGDIEAVVKGHSFMMSKSWIRVLSGKEEAYYGWVALNYKMGTFDDNYPKSPTLGLVDIGGSSLQIVAEIDVAVDDVHVMKSRLGSTEHRIVAYSLPAFGLNEAFDRTVLRLRNNQSEERTASISDLRHPCLLSTYVQNYTCHSCSALASIYEKKHSQDQESELYSLRLTGEPNWEQCLELAIGAAMNSSSKVSHLTVSKNCQASLFSGTDILNLTAVAQPAKFHALSGFFFVYNKLNLSPRTNLTMVWESGKQICSNLWSGLSSVSGNPDYAGLFCFQVAYMASLIDYGLCLGDVEMVFGPGDISWTLGAALIEGKFLWLNSTSYEVHVIISTLKNVKVTSSPTVLFAVLVLLSLIVYCSQIKLPMPSRRDSAPGSSLPSYTPVRRRSN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6255g00001 557 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 483 IPR000407 GO:0016787
Vium6255g00001 557 Pfam GDA1/CD39 (nucleoside phosphatase) family 46 482 IPR000407 GO:0016787
Vium6255g00001 557 Gene3D Exopolyphosphatase. Domain 2 193 466 - -
Vium6255g00001 557 MobiDBLite consensus disorder prediction 541 557 - -
Vium6255g00001 557 MobiDBLite consensus disorder prediction 534 557 - -
Vium6255g00001 557 Gene3D - 39 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6255g00001 Vium-Chr6255 37067 39592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6255g00001 19 486 Nodulin-like Gene Family AT4G19180 35.565 6.49e-86 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6255g00001 - - vun:114175521 1016.53