Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6251g00010 ATGGCCCCGGCAGCGCCGCAGACTCCGACACCGGAAACCACCCCGTTGGGCCACCAACTCTTCACGCGGATCCGCCTGGCCACCCCATCCGATATTCCCCACATCCACAAACTCATCCACCAAATGGCCGTCTTCGAACGTCTGACCCACCTCTTCTCCGCCACCGAGTCCTCCCTGTCTGCCACCCTCTTCTCCCCCACCGTCCAACCCTTCCACTCCTTCACCATCTTGCTTCTAGAAGCTTCGCCCACCCTCTTCCCTGTTTCAACCTTTGATTCCAACCCTTTCTTCAAACCCCTGACTGAAGTCGTGAATCTGAGGCTCCCCTTTGAGGACCCCGAGCGCGACACGTTCAAGAGCATGGATGACGTTACTGTTGTAGGTTATGTGATGTTTTTTCCAAATTATTCAACTTTTCTGGGAAAACCAGGGTTTTACGTGGAGAACTTGTACGTGAGGGAGTGTTACAGGAGAATGGGGTTTGGGAAAATGTTGTTTAGTGCAGTGGCAAAGGAAGCAGTAAAAATGAAGTACGGAAGGGTAGACTGGGTTGTGCTTGATTGGAATGTTGATGCCCTTAGGTTTTACGAAGACATGGGTGCTGAGATTGTGGAGGAATACAAGTTTTTCAGATTGACTGGGAAGGCTCTTCAAGCTTCTGGACACGCTCACTGA 675 0.5156 MAPAAPQTPTPETTPLGHQLFTRIRLATPSDIPHIHKLIHQMAVFERLTHLFSATESSLSATLFSPTVQPFHSFTILLLEASPTLFPVSTFDSNPFFKPLTEVVNLRLPFEDPERDTFKSMDDVTVVGYVMFFPNYSTFLGKPGFYVENLYVRECYRRMGFGKMLFSAVAKEAVKMKYGRVDWVVLDWNVDALRFYEDMGAEIVEEYKFFRLTGKALQASGHAH 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6251g00010 224 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 23 214 IPR016181 -
Vium6251g00010 224 Gene3D - 22 223 - -
Vium6251g00010 224 PANTHER DIAMINE N-ACETYLTRANSFERASE 22 219 - -
Vium6251g00010 224 CDD NAT_SF 122 181 - -
Vium6251g00010 224 FunFam probable acetyltransferase NATA1-like 22 223 - -
Vium6251g00010 224 Pfam Acetyltransferase (GNAT) family 110 200 IPR000182 GO:0016747
Vium6251g00010 224 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 76 218 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6251g00010 Vium-Chr6251 115066 115819 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium6251g00010 Acetyltransf_1 9.8e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6251g00010 K22883 - gmx:100782562 323.939