Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6251g00007 ATGAGTGGGGAGATGAAGTTTGAGGAGGAGCAGAGAAGATACATAAAACCCTCCATAGCCACACCACCACACCTTCAAACCTTCAAACTCTCTTTACTTGACCAGCTTTTCCCAAACATCCATGGCAACATCACCTTCTTTTACCCTCACACCACCACCCACACACTTCCACACTTCTCCACCAAATCCCAACTCCTTCAAACCTCACTCTCCCAAACCTTGACCCGCTTCTATCCTCTCGCCGGAAACCTCCATGACGCCACCACCCTCCACTGCAACGACGCCGGTGCCCTCTTCATCCAATCCCAGACCAATGTCTCTCTCTCCGACATCCTCAAAGCTCCGAGCTTTAACACCCTCCAATGTCTCATCCCCTCCACCGATAACCAAACCTCAACAAACGCGGCCATGCTCCTCGTACGCTTCACTTCCTTTAGCTGCGGCGGCACCGCCGTAACCATTTCTCTCTCCCACAAAATCGCCGACATTGCAGCCGTCATCGCACTCCTCAAAACCTGGACCGCTGCCTGCGCCGGAGAAACCCCCACGAGGGACCCCGAACTCGCCGCCGGCGCCGCGCTCTTCCCTCCGAGAGAGCTTCCCGCAGTGACGGCATCCGTAAACACCGTGTCGTCGGAGAACTTCACGTCGAGAAGGTTCGTTTTCGAAGCGTCCAAGGTGAAAGCGCTAAAGAAGAGAATAGGAGAAGGTTGCGCGTTCGAACCTTCGAGGGTGGAGGTGGTGTTGGCTCTCATATGGAAATGCGCTCTCTCGGCTTCTCGCCCGGAAACGGCGTCGTTCAAGCATTCGGTTTTGTTCCAAGCGGTGAACCTCCGTCCCCGGATGGAGCCGGCGGTGGCGGACGGAGCCTTGGGGAACTTTGTATGGCCATTCGCGGTGACGGTGGAGGAGGAGGAGCAGTTGGAGTTGCAGTTGATGGTGAAGAGGATGAGGGAGAGTATGAAGGAGTTTGTGGAAAGTAAGGCAAAGAGGTTGAAAGAGGATGGTGGTTTTGGAGTGTTTATGGAGAGTCTGAAGGAGAGAGGTGAAGTTTTGAAGCAGAACAGCGTTGTTTATAAGTGTTCGAGTTGGTGCAAGTTTCCACTGGCTGAGGTTGATTTTGGTTGGGGCGAAGCAGTGTGGGCATGCAGTGTGAATAAGATTGCTAGTAACACCATTGCTTTGATGGATACAAGGGACGGTGGTGTTGAAGCTTTCGTCACTCTCGATCACCAACACATGCTTCTCTTTCAACAACATCACCTTCTTCTACACTACGCTTTGCTTAATCCCTCTGTTATGCTCTGA 1308 0.5298 MSGEMKFEEEQRRYIKPSIATPPHLQTFKLSLLDQLFPNIHGNITFFYPHTTTHTLPHFSTKSQLLQTSLSQTLTRFYPLAGNLHDATTLHCNDAGALFIQSQTNVSLSDILKAPSFNTLQCLIPSTDNQTSTNAAMLLVRFTSFSCGGTAVTISLSHKIADIAAVIALLKTWTAACAGETPTRDPELAAGAALFPPRELPAVTASVNTVSSENFTSRRFVFEASKVKALKKRIGEGCAFEPSRVEVVLALIWKCALSASRPETASFKHSVLFQAVNLRPRMEPAVADGALGNFVWPFAVTVEEEEQLELQLMVKRMRESMKEFVESKAKRLKEDGGFGVFMESLKERGEVLKQNSVVYKCSSWCKFPLAEVDFGWGEAVWACSVNKIASNTIALMDTRDGGVEAFVTLDHQHMLLFQQHHLLLHYALLNPSVML 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6251g00007 435 Gene3D - 5 203 IPR023213 -
Vium6251g00007 435 Pfam Transferase family 6 421 - -
Vium6251g00007 435 Gene3D - 212 425 IPR023213 -
Vium6251g00007 435 PANTHER F21J9.9 12 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6251g00007 Vium-Chr6251 70122 71516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6251g00007 5 419 Monolignol Biosynthesis Gene Families AT5G48930 23.673 5.04e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6251g00007 - - gmx:100808502 607.06