Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6251g00004 ATTTCACCCGGGGCGAGGCGCTTGATCTCTAATTTGCTGGTTGTGGACCCAGAGAAGGGGTATTCCCTTCTTGACATCATGAAGGATCCTTCGTTCCAAGTTGGGTTCGTGCGCCCCATTGCGTTTTCCATGAAGGAGACAGTTGTGGAGGATAACATCGACTTCAACGGGGACGATGTCGGTGGCAGTGGAAACATTAGCGGCAGTGAAGATGGTAACAACAACAACAACCATTCTAGGGAACTGGTCGGGGCCAAGCCAGCTCGTCCGTCTTACAATGCTTTCGAGATAATATCATCATTGTCGCACGGGTTTGATCTGAGTAATCTGTTCGAGACGAGGAAGCGCTCGCCGTCGATGTTCATATCGAAGCACTCGGCGTCGTCGGTGATGGCGAAGCTAGAGGCGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGCAGTTCACGGTGAGAATGCAGGGAGCGACAAAAGGGAGGAAGGGAAAGTTGGGGATGACAGTGAAGGTGTTCGAGGTGTGCGGTGGTGGAGTTTTCGAAACCCAACTTTTAAAATGTTTCTTTTATCAAATGCCATGTACAATGGTCTCTCAATGCCACGTTTAA 612 0.5033 ISPGARRLISNLLVVDPEKGYSLLDIMKDPSFQVGFVRPIAFSMKETVVEDNIDFNGDDVGGSGNISGSEDGNNNNNHSRELVGAKPARPSYNAFEIISSLSHGFDLSNLFETRKRSPSMFISKHSASSVMAKLEAVAKKLNFRVTGKKQFTVRMQGATKGRKGKLGMTVKVFEVCGGGVFETQLLKCFFYQMPCTMVSQCHV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6251g00004 203 MobiDBLite consensus disorder prediction 60 83 - -
Vium6251g00004 203 ProSiteProfiles NAF domain profile. 87 112 IPR018451 GO:0007165
Vium6251g00004 203 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 174 - -
Vium6251g00004 203 Pfam NAF domain 91 146 IPR004041 GO:0007165
Vium6251g00004 203 CDD CIPK_C 93 175 - -
Vium6251g00004 203 Gene3D Kinase associated domain 1, KA1 88 180 - -
Vium6251g00004 203 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6251g00004 Vium-Chr6251 50522 51133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6251g00004 2 175 CBL-interacting serine-threonine protein kinases AT5G10930 43.429 3.98e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6251g00004 - - var:108324458 363.229