Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium624g00003 ATGGAAGTGAAAGCTGAGATTGTATCTAAGGAGACAATAAAGCCATCTTCTCCAACATCCAATAAGCTTTTCAAACTCTCTCTCCTCGATCAATTGGCTCCTCCATTTTACGTTCCTATTCTCCTCTTTTACTCTGCTTCCGATGCCACACACAACAAACCAATATCTCATTAATTGAAGGCTTCTTTATCACAAGTCCTCACTCTCTATTATCCCTTTTGCGGAACCTTCAGAGTCAACTCAACCGTTGAGTGCAACGATGAGGGCGTTGTTTTCACCGACTGTAGAGTCCTCATGGAACTCTCAAGCCTTCTTAAAAACCCTGACCTTCACCATATCAACCACCTTTTCCCATGCGATCCCTACAACTCTGCAAGGGAAACTCTCACTGGGAACATGGCAGTTCATTTCAACCACTTCACTTGTGGAGGTTTTGCGCTTGGCGTCTGCTTCTCACACAAGATCGCTGATGCTTCCACAGCTGCATCCTTCCTCACTGCTTGGGCTGCAACATCAAGAGGCAACAAACCGATACTACCACAAACGGAAGAAGGCGCACAGGTTTTTCCGCCGAGGAAGATAGAAATGGACATGATTCGTGGCATGATGGGCCAAAAAAGCATTGTCACAAAGAGGTTTGTGTTCAACAGGACGAACATATCTAGACTGAAGCAGAAGCTGGGGAGCTTCGATTTCACTCCCACTAGTGTTGAAGCCGTGACANAACAGGTGAAAAAGTCTCAAACATTTCTTTTCTACCTTCCCCCTTCTTTCACCATGTCTACCTATTTTGATTATGTGAATACTGCTTCTTCTGCTTGTGCCTATAATTATGATTCTCCTTCTGCATCTAACTTTGAGTACAATCCTCATGTATATTCTGCTGATTTCTATGTTGAGAACAATATGACTCATCCTCTAACTCCTGAGAGTGCTCCTTGGGAGCCGGTTCCACTTGATAAGGAGGATATTCGTTGCGTTTTCAACACTGGATTGATACAGTTGCTGCCCCAGTTTCATGGTTTTGCAGGTGAATGCCCACATAAACATTTAGAGAAGTTCTATCTCATTTGCTCTACAATGAAACCTCCAGATGTCCCGGATGATCACATTTTCATAAGAGCATTTTCACACCCATTACAAGGAGCAGCGAAAGATTGGGAATATTGTCTTCCTCCAGGATCCGTTACCAGTTGGGAAGATCTTGAGCATCAGTTTTTGAGCGAATTCTCCCCTGTGCAATATGGTTACAACAACGATCCTGGGTGGAATGATCCTAGCTTGGGATGGTATGATGCTCCACAACAATATCAGAAAGCACCATCTCAAAATGCTTGTATGACTCCACCAGTCCAGCAATACCAGAGTCAGCAACATGATGCTCCTGCCCGAATATCTCCTCAGCCTTCTACTTCTGAACCTACATTGGAGGAGTTACTGAAGTAG 1446 0.4412 MEVKAEIVSKETIKPSSPTSNKLFKLSLLDQLAPPFYVPILLFYSASDATHNKPISHXLKASLSQVLTLYYPFCGTFRVNSTVECNDEGVVFTDCRVLMELSSLLKNPDLHHINHLFPCDPYNSARETLTGNMAVHFNHFTCGGFALGVCFSHKIADASTAASFLTAWAATSRGNKPILPQTEEGAQVFPPRKIEMDMIRGMMGQKSIVTKRFVFNRTNISRLKQKLGSFDFTPTSVEAVTXQVKKSQTFLFYLPPSFTMSTYFDYVNTASSACAYNYDSPSASNFEYNPHVYSADFYVENNMTHPLTPESAPWEPVPLDKEDIRCVFNTGLIQLLPQFHGFAGECPHKHLEKFYLICSTMKPPDVPDDHIFIRAFSHPLQGAAKDWEYCLPPGSVTSWEDLEHQFLSEFSPVQYGYNNDPGWNDPSLGWYDAPQQYQKAPSQNACMTPPVQQYQSQQHDAPARISPQPSTSEPTLEELLK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium624g00003 481 Gene3D - 1 198 IPR023213 -
Vium624g00003 481 MobiDBLite consensus disorder prediction 439 481 - -
Vium624g00003 481 Pfam Transferase family 4 242 - -
Vium624g00003 481 MobiDBLite consensus disorder prediction 439 475 - -
Vium624g00003 481 PANTHER F21J9.9 6 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium624g00003 Vium-Chr624 67981 86828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium624g00003 3 180 Monolignol Biosynthesis Gene Families AT5G48930 24.227 1.80e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium624g00003 - K13065 gmx:100792323 347.051