Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6238g00005 ACAAAATATGCAGATCGTGGTAGTGAGCTAATGGGTAAAACCTTAGAGGAAAGGGCTTTGGTGGAGCAGTGGCTTGAAGTAGAAGCACACAACTTTAATAATTTATGTTTCACTATAATGTTTCAGCGTGTGATCCTACCAAGGATGGGTAAGGTTGGGAACTTGGTCTTGGCAGACATAAGTGAGAAAGATTTAGTGAAGGTCCTTGATGTGTATGAAAGTAGGCTCTCTCAAAGCTCATACCTTGCAGGAGATTTTTTCTCTTTGGCTGATCTCAGCCACCTTCCAGGGCTTGGACATCTTATTGAGGAAGCCAAACTTGGCCACTTGGTAACTGAGAGGAAGAATGTCTATGCATGGTGGCAGAAAATTTCAAACAGGCCAACTTGGAAGAAGTTAAAAGATCTGGCTCACTGA 417 0.4269 TKYADRGSELMGKTLEERALVEQWLEVEAHNFNNLCFTIMFQRVILPRMGKVGNLVLADISEKDLVKVLDVYESRLSQSSYLAGDFFSLADLSHLPGLGHLIEEAKLGHLVTERKNVYAWWQKISNRPTWKKLKDLAH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6238g00005 138 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 14 138 IPR010987 -
Vium6238g00005 138 FunFam Glutathione S-transferase F2 12 134 - -
Vium6238g00005 138 Pfam Glutathione S-transferase, C-terminal domain 57 128 IPR004046 -
Vium6238g00005 138 SUPERFAMILY GST C-terminal domain-like 7 133 IPR036282 -
Vium6238g00005 138 Gene3D - 12 133 - -
Vium6238g00005 138 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 134 - -
Vium6238g00005 138 CDD GST_C_Phi 16 134 IPR034347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6238g00005 Vium-Chr6238 35881 36481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6238g00005 1 137 Glutathione S-transferase Gene Family AT3G03190 48.905 1.28e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6238g00005 K00799 - gmx:100796010 235.728