Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6215g00004 ATGGCCAAGCTCAGTGTAAGAAGCAGCAAGAGAAGTGTCAGTGACATTGTGAAGTTCAAATTCGTGGAGAAGCTCCAGAAGAGACTCTTACCAGGGAGAAGCAAAGAAGGGTCTGTTTCAAACTCAACGTATGTTCCAGAGGATGTGAAGGAAGGACACTTCGCTGTGATTGCTGAGGGTGGAGAAGAACACAAGAGGTTTGTGCTGCCACTCAGTTGTTTATCCAACCCTACGTTTTTGAAGCTGTTGGAGCAAGCAGAAGAAGAGTATGGCTTTGATCATGAAGGTGCTGTCACCATTCCTTGCAGGCCCAGTGACCTTGAGAGGATACTGGCTCATCAATGGCATCATCAAGGAACTCAAACTTCTCGTTCAAGAAAAGCTCACAGAAAATCCATCGTTTTTTAA 408 0.4534 MAKLSVRSSKRSVSDIVKFKFVEKLQKRLLPGRSKEGSVSNSTYVPEDVKEGHFAVIAEGGEEHKRFVLPLSCLSNPTFLKLLEQAEEEYGFDHEGAVTIPCRPSDLERILAHQWHHQGTQTSRSRKAHRKSIVF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6215g00004 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 110 IPR003676 GO:0009733
Vium6215g00004 135 Pfam Auxin responsive protein 32 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6215g00004 Vium-Chr6215 49590 50169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6215g00004 25 123 Calmodulin-binding Proteins AT3G43120 42.157 3.30e-17 71.6