Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6200g00017 ATGGGCAGATCCATTTTTCTTCTTCACCTTATGCTTTCCTCATTTCTCCTTTTTACTTTCTTCCTGGAAGCTGTTCCTGGCAGCAGAAAGTTATATATTGTATATTTGGGAGCTCATTCTCATGGTGCCTACCCCACTTCCGTTGATCTCCAAATTGCTACCGATTCTCATTATAATTTATTGGCTTCAGTCCTGGGGAGTGAAGAGAAAGCGAAAGAAGCAGTTATTTACTCATACAACAAACACATAAATGGGTTTGCAGCAATGCTGGAAGAGGAAGAAGCAGCACATATCGGCAAAAAGCCGAACGTGGTGTCAGTGTTCTTGAGCAATAAACATAAACTGCACACTACCCGTTCATGGGAATTTCTTGGACTACACAGAAATGGTAAGAACTCCGCATGGCAAAAGGGAAACTTTGGTGAAAATACAATAATCGCAAACATCGACACTGGTGTTTGGCCAGAGTCAGAGAGCTTCAGTGATGAAGAATATGGTCCCGTTCCCTCCAAATGGCGTGGTGGTAATGTCTGTCAAATTAACAAATTTTTAAGCAACAAGACAAATCTATGCAACAGGTTTTTGTTTTTTGTTTTCCTTCAATATATATTTACAAGTTCTGAAATAGCTAGTAAGGACTAA 642 0.3988 MGRSIFLLHLMLSSFLLFTFFLEAVPGSRKLYIVYLGAHSHGAYPTSVDLQIATDSHYNLLASVLGSEEKAKEAVIYSYNKHINGFAAMLEEEEAAHIGKKPNVVSVFLSNKHKLHTTRSWEFLGLHRNGKNSAWQKGNFGENTIIANIDTGVWPESESFSDEEYGPVPSKWRGGNVCQINKFLSNKTNLCNRFLFFVFLQYIFTSSEIASKD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6200g00017 213 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Vium6200g00017 213 Gene3D Peptidase S8/S53 domain 117 198 IPR036852 GO:0004252|GO:0006508
Vium6200g00017 213 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Vium6200g00017 213 FunFam Subtilisin-like protease SBT5.3 22 116 - -
Vium6200g00017 213 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 195 IPR045051 -
Vium6200g00017 213 SUPERFAMILY Subtilisin-like 6 186 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6200g00017 Vium-Chr6200 116587 118618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6200g00017 19 196 Subtilisin-like Serine Gene Family AT5G59810 51.934 8.34e-53 179