Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6199g00001 ATGAGAATGGAAATTAACATCACATCAAGAGAAACCATTAAACCATCACTGCCAACTTCTGTAGAATGCAAAACCCTAAAATTATGCTTGTTTGATGTCTTTCAACTCAACACCTATTTTCCATTGATCCTCTTTTACAAAAACACCACCAACCTTGAAGGATTTTCAGAATGCTCAACTCAGTTGAAGAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGCAGGTAGAAGATGTGATTACTTTTCCATTGATTGCAACGATGAAGGTGTAATTTTCATGGAAGCTTCGGTGAACACCACCATGGAAGTTCTCTTAAAACCACCCAATCTAGAACAGTTAAACCAGTTACTTCCATGTGAGCCTATCAAGTGTCATCCTCACCAAGAAGTGTTGCCACAGTTTCTTGTTCAAGTAAACAAATTCCAATGTGGAGGAATAGCCATTGGCTTGTGCAACCTCCACATTCTCTTGGATGCATATTCTTGCAGTGCCTTCTTGAAAACCTGGTTTTCCATTTGCAAAGGGTCAAAGGGAGAAATCTCAAGGCCAAATTTCTCTTCTGCTGCTTCTGCCTTCCCTCCAGCAATCCCCACTAGTGTACGTCCTTGCATATTTAATGTAATAGAAGAAAACTGCACCACAAGAAGATTCTTGTTTGATCACAAAGCCATCAATGAGCTAAAATCCATGTCAACATGTGATGAAACAAAACCTACACGATATCAGGTAGTATCTTCATTCATAAGCAAACATATGATTGTAGCAATCAAAGAAGAATGTTGTGAAAAAACAAGGGCAGCGGTTGCATTGCATATAGGGGACATAAGAAAAAGGATGGGGGAACCTTTTATAGAAGGTGCCGTTGGAAATTTGGTTTGGCCTGCATTGGTATTTGTTGAGGGTGTGAACAAGAACACTAAGATCATAGATTTGGTTGAAATTCTGAAAAAAGGACTTGGAAAGCTCACAAAGGATGTGTTTCTAAACGTGCAGAACGATCCTAGTTTTTTGTGGAATGGTGAGTATGCAGAGCTAATGCTTGAAGGTATACCAAAAAATGAAACAATCTCCTTGGTGTTCACAAGTTGGGTTAATATTGGATTCAATGAAGTGGATTTTGGTTGTGGAAATCCTTTTTGGCTAGCTTACGGAGGAGGTACTAAAGTTACTACATCAAACTCAGTAATATTGATGGAAACAAGAGAGGGAATAGAGGCATGGATCACGATGACAGAGAAACATATAACTATCTTGGAACAGGACGTGGATTTCCTTCGATTTGCATTCCTTAATCCAAGTGTTTCAATCTGA 1320 0.3902 MRMEINITSRETIKPSLPTSVECKTLKLCLFDVFQLNTYFPLILFYKNTTNLEGFSECSTQLKKSLSEALTIFYPLAGRRCDYFSIDCNDEGVIFMEASVNTTMEVLLKPPNLEQLNQLLPCEPIKCHPHQEVLPQFLVQVNKFQCGGIAIGLCNLHILLDAYSCSAFLKTWFSICKGSKGEISRPNFSSAASAFPPAIPTSVRPCIFNVIEENCTTRRFLFDHKAINELKSMSTCDETKPTRYQVVSSFISKHMIVAIKEECCEKTRAAVALHIGDIRKRMGEPFIEGAVGNLVWPALVFVEGVNKNTKIIDLVEILKKGLGKLTKDVFLNVQNDPSFLWNGEYAELMLEGIPKNETISLVFTSWVNIGFNEVDFGCGNPFWLAYGGGTKVTTSNSVILMETREGIEAWITMTEKHITILEQDVDFLRFAFLNPSVSI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6199g00001 439 PANTHER F21J9.9 6 431 - -
Vium6199g00001 439 Pfam Transferase family 3 427 - -
Vium6199g00001 439 Gene3D - 1 202 IPR023213 -
Vium6199g00001 439 Gene3D - 212 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6199g00001 Vium-Chr6199 7703 9022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6199g00001 3 423 Monolignol Biosynthesis Gene Families AT5G48930 23.778 8.45e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6199g00001 - - vum:124842637 875.159