Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6184g00001 ATGAAAGAGGTGAAAAAACTGGTTTATCTGCATGGTGCTCTGTGTGAAGCTCTGAGACTTTTTCCTCCAGTTCCTATTGAACGGAAGCAAGCAGTTAAAGCTGACACTCTTCCAAGTGGGCACAGAGTAAATGGCAATACAATGCTACTGTTTTCTCTGTATGCAATGGGAAGGTGTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAAAGATGGATATCTGAGAGAGGAGAAATTGTTTATGCACCAGCTTATAAATTCATTGCTTTTAATGCAGGACCAAGAATCTGTTTGGGAAAAGACTTGGCGTTTCTCCAAATGAAGATGGTGGCTGCTGCTATTTTGAGGAAGTACTGTTTCATAGTGGAGGAAGGTCATATTGCAACTCCAACACATTCAATTTTTCTTCTAATGAAGAACGGTTTGAAGGGTAGGATAATGAAAAGAGAAGTTTGA 465 0.4 MKEVKKLVYLHGALCEALRLFPPVPIERKQAVKADTLPSGHRVNGNTMLLFSLYAMGRCEEIWGKDCLEFKPERWISERGEIVYAPAYKFIAFNAGPRICLGKDLAFLQMKMVAAAILRKYCFIVEEGHIATPTHSIFLLMKNGLKGRIMKREV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6184g00001 154 PANTHER CYTOCHROME P450 2 145 - -
Vium6184g00001 154 Gene3D Cytochrome P450 1 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6184g00001 154 Pfam Cytochrome P450 1 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6184g00001 154 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 93 102 IPR017972 GO:0005506|GO:0016705
Vium6184g00001 154 SUPERFAMILY Cytochrome P450 2 152 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6184g00001 154 PRINTS E-class P450 group IV signature 58 76 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6184g00001 154 PRINTS E-class P450 group IV signature 84 100 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6184g00001 154 PRINTS E-class P450 group IV signature 7 23 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6184g00001 154 PRINTS E-class P450 group IV signature 100 118 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6184g00001 Vium-Chr6184 36 661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6184g00001 2 152 Cytochrome P450 AT4G39480 58.278 4.36e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6184g00001 - - vum:124842600 317.005