Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6132g00001 ATGGCTTCAGATCGGAAAATTCACACTTTCGGGGAGGTCGCAAAGCACAACAAGACCAAGGATTGTTGGCTCGTCATTTCGGGAAAGGTGTATGATGTCACCCCTTTCATGGAGGAACATCCCGGAGGTGATGAGGTTTTGTTGTCTGCCACAGGGAAAGATGCAACCAATGATTTTGAAGACGTGGGGCACAGTGATAGTGCAAGAGATATGATGGCAAAATACTACATTGGTGAGATTGATTCATCAAGTGTTCCCCTGAAGCGGACCTACGCTCCACCTCAGCAAGTTCTGTACAGTTCTGATAAGACTTCGGATGTTCTGATCAAGATCTTGCAATTCCTGGTCCCTCTCCTGATATTGGGCTTGGCCTTTGTTGTCCGGCACTACACCAAGAAAGAGTAA 405 0.4691 MASDRKIHTFGEVAKHNKTKDCWLVISGKVYDVTPFMEEHPGGDEVLLSATGKDATNDFEDVGHSDSARDMMAKYYIGEIDSSSVPLKRTYAPPQQVLYSSDKTSDVLIKILQFLVPLLILGLAFVVRHYTKKE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6132g00001 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vium6132g00001 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vium6132g00001 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vium6132g00001 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vium6132g00001 134 FunFam Cytochrome b5 type B 2 85 - -
Vium6132g00001 134 Gene3D - 1 85 IPR036400 -
Vium6132g00001 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 12 80 IPR001199 -
Vium6132g00001 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vium6132g00001 134 PANTHER CYTOCHROME B5 3 131 - -
Vium6132g00001 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vium6132g00001 134 SMART Cyt_b5_2 8 81 IPR001199 -
Vium6132g00001 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 89 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6132g00001 Vium-Chr6132 2499 5851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6132g00001 1 134 NADPH P450 reductases AT5G53560 79.104 1.30e-79 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6132g00001 K23490 - gmx:100499823 245.358