Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium611g00011 ATGCATATAGAAGAATTGAAGGGGGGTGACATAGAAGAAGGTGAGGAGGAAAGAGGGTTGACGCTTCTGGGTTATGATGCAAAGAGGGTGTTGGTTGGAGCAGGTGCTCGTGTGCTATTCTACCCAACCCTTTTTTACAATGTTGTCAGGAATAAGATTGAGGCTGATTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCATTTCCTATTGATGTTCCACACTTAAAGAAGCTTGGTGTTCGTGGGGTCATCACATTGAATGAGTCATATGAAACTTTGGTTCCGACAACATTATATTATAAAATGCAATATCTGGACGCACTACATATGTGCATTGCAAAGCTGGACGCGGTCGCAGCACAACTATTGTTATTTGTTATCTGGTGCACCACAAAATGA 417 0.4221 MHIEELKGGDIEEGEEERGLTLLGYDAKRVLVGAGARVLFYPTLFYNVVRNKIEADFRWWDKVDEFILLGAVPFPIDVPHLKKLGVRGVITLNESYETLVPTTLYYKMQYLDALHMCIAKLDAVAAQLLLFVIWCTTK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium611g00011 138 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 109 - -
Vium611g00011 138 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 129 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium611g00011 Vium-Chr611 128390 131272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium611g00011 1 122 Protein tyrosine phosphatase (PTP) family AT2G35680 56.204 4.36e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium611g00011 - - gmx:100790413 171.4