Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6109g00019 ATGAACTTCAACAAGCAGCTTTTTCTTCTTCTCAATCTTTTCTCGGTTCTATTTCTTTCAGGAGAAAGAGTGTTGCAAGCAGAGGCTGGCCATCGTCATCATCACCATCACCATCATGGTCCAACAAAGTTGTTCGTTTTCGGAGACTCGTATGCTGACACAGGCAACATTCAGAAAGCTGTTTCAAGCTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGCAGATTTTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAAAGTGAAATCACCAATTCCCTACAGATATAGAAAACTGATGCCACAACATGTAAAATATGGGATGAACTTTGCGTTTGGAGGTACCGGTGTTTTCAACACGTCGGTTCCACTTCCAAACATGACAAACCAGATAGATTTCTTGCAACAGCTCATCAAAGACAAAGTCTACTCTGCCTTAGATCTCACCAATTCAGTTGCCCTTGTTTCTGTCGCTGGAAATGACTACAGTCATTTCTTGCAAACAAATGGTTCTGAGGGTTTATCATCTTTCGTGGCTTCAGTGATTAATCAAACAACGATGAATCTGATTCGCATAAGAGAGCTGGGAGTGAAGAAAGTAGTTGTGGGTGCTCTGCAACCCATTGGATGCCTTCCCCAGATCACAGCCTCAATCTCATTCCAACGTTGCAATGAAACCCCCAACGCCCTCGTGTTTCTCCACAACACACTCTTGAACCAAGCAGTGACCACGTTAAACCAACAAACCAAGGAGCGTTCCACGTTCCGAATTCTTAACCTCTTCGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACACACAACATTCGGGACAGGTTGAAGCCATGTTGTGTTGGTGTGAGCAGTAACTACTCGTGCGGGAGTGTGGACAACAATGTTAAGAAATATAGGGTATGCGATGATCCCAAATCTGCTTTCTTTTGGGATTTTGTGCACCCTACACAAGCTGGATGGCATGCAGTGTACAACAAGTTGCGAACCATGAATGAACTTCAACGGATTCTTTACTAG 1059 0.4485 MNFNKQLFLLLNLFSVLFLSGERVLQAEAGHRHHHHHHHGPTKLFVFGDSYADTGNIQKAVSSSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRYRKLMPQHVKYGMNFAFGGTGVFNTSVPLPNMTNQIDFLQQLIKDKVYSALDLTNSVALVSVAGNDYSHFLQTNGSEGLSSFVASVINQTTMNLIRIRELGVKKVVVGALQPIGCLPQITASISFQRCNETPNALVFLHNTLLNQAVTTLNQQTKERSTFRILNLFDSFMSVLNHPSTHNIRDRLKPCCVGVSSNYSCGSVDNNVKKYRVCDDPKSAFFWDFVHPTQAGWHAVYNKLRTMNELQRILY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6109g00019 352 PANTHER OSJNBB0059K02.9 PROTEIN 14 348 - -
Vium6109g00019 352 Pfam GDSL-like Lipase/Acylhydrolase 44 340 IPR001087 GO:0016788
Vium6109g00019 352 SUPERFAMILY SGNH hydrolase 40 341 - -
Vium6109g00019 352 Gene3D SGNH hydrolase 29 348 IPR036514 -
Vium6109g00019 352 CDD SGNH_plant_lipase_like 44 341 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6109g00019 Vium-Chr6109 96621 99844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6109g00019 3 337 Pollen Coat Proteome AT1G75930 26.039 1.69e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6109g00019 - - gmx:100818373 570.852