Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6104g00002 ATGGATATGGCTCAGCTGAAGACACGAGCTCGAACTGCATTGGGCGTTGGAGCTTCTTCGACTTCACCGAAGAGAAGGAAAATCGCCATTAACAAAAACAGCAACAACATCTCACCGTCCTCCTGCGTTCAACTCAAGAGTAATACAACGTCGCCGGAGTCGGAGGAGCGCTGCTCCGGTGAATCTCCGGCGTCGTGTTGCTCCAGCAACGGATCATTCGACGAAAACCGAATCATCAAATTCTCAGATCTGGAGGTAGAGAACGCTCAAGTTGAAACGTCGACGTGCAACTGCGGTGAACAACAAATGAGGAGGGAGATGAGTCTCTCGAGTGACCTTCGAATTACGAATTCGCAGGAGGTGGATTCAGCGGAGAAGAAGCCAACGATGCAGACCAAAACCAAATCTCGATGTTGCGTTCCACCAGCGCCGCAGAAAATGCCAACGGAGTCAGAGCTCGAAGAATTCTTCACCGCCGCTGAGAAAGACATTCAGAAACGCTTCTCAGAAAAGTATAATTATGATATTGTGAAGGACATTCCCTTGGAAGGACGATACGAGTGGGTGAAATTGAAGCCATAA 582 0.4897 MDMAQLKTRARTALGVGASSTSPKRRKIAINKNSNNISPSSCVQLKSNTTSPESEERCSGESPASCCSSNGSFDENRIIKFSDLEVENAQVETSTCNCGEQQMRREMSLSSDLRITNSQEVDSAEKKPTMQTKTKSRCCVPPAPQKMPTESELEEFFTAAEKDIQKRFSEKYNYDIVKDIPLEGRYEWVKLKP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6104g00002 193 Gene3D p27 135 193 IPR044898 -
Vium6104g00002 193 MobiDBLite consensus disorder prediction 1 69 - -
Vium6104g00002 193 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 192 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vium6104g00002 193 Pfam Cyclin-dependent kinase inhibitor 147 191 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vium6104g00002 193 MobiDBLite consensus disorder prediction 14 69 - -
Vium6104g00002 193 MobiDBLite consensus disorder prediction 107 147 - -
Vium6104g00002 193 MobiDBLite consensus disorder prediction 107 125 - -
Vium6104g00002 193 PIRSF CKI_KRP_plant 1 193 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6104g00002 Vium-Chr6104 17520 19588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6104g00002 79 193 Core Cell Cycle Gene Families AT1G49620 43.966 9.59e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6104g00002 - - ccaj:109818608 277.33