Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6100g00007 AAGGAGAACCTATGTCTATATGGATTCCCCAATGAACAATGGGAAGTTAATTTGCCAGCTGAAGAAGTTCCTCCAGAACTTCCCGAACCTGCATTGGGCATAAACTTTGCTAGGGATGGGATGCAAGAAAAGGACTGGTTATCTTTAGTTGCTGTTCACAGTGATGCATGGCTACAGTCCGTGGCTTTCTACTTTGGAGCGAGATTTGGTTTTGATAAAGCTGACAGGTTAGAGCTATGTTTCATTTATGCAATTGCGATAGGAAAAGCGCAGCTGAAAAAAGCACAAGCAAGACGCATTTCTTATGCCGTGTCATTGACTGTCTTTCCTTTGCTTATAATACTGAGCCAAAATGGTTTAGGCTATTTAACTATTTCATGA 381 0.4121 KENLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLQSVAFYFGARFGFDKADRLELCFIYAIAIGKAQLKKAQARRISYAVSLTVFPLLIILSQNGLGYLTIS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6100g00007 126 PANTHER CPG BINDING PROTEIN 1 79 IPR045104 GO:0006355|GO:0042393
Vium6100g00007 126 Pfam Alfin 1 79 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6100g00007 Vium-Chr6100 42025 42665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6100g00007 1 96 Alfin-like Transcription Factor Family AT5G20510 69.903 1.42e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6100g00007 K26274 - pda:103712845 159.073