Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6093g00001 ATGGAGGAAGAAATCAAATCCGAATTCAAAAGCAGCGGTTTCGACATCGAAGACGAACAAGAAATTCTCAGAAAATGTGTCACTTTCTGCACCAACTACAGTTTCACTCCTTCTTTGGTTGTTTTTGACAGACAGCTGAATGAACCAGTTGTAGAGAGTGCCGAGATTGATGGCTTTCTGTTGCAGCTGCAAAATGAGAAGAAAGAGGACAGTGTAAAAGAAAGGGAAGAAGGTGGCTTGCATATGTACTCTATCGGAGATGTAGAAATGCACTTAAATAATGATGATGATACAAAGGACGATACTCCTGGAACTCCAATAAATCACCATCATGATCTTTTATCTCCTTCAACTGATCCAATATCTTTAATGTATGAGAATGTTTTATCTTCTGGGAAAGCATCAAAATCAAAACTAATAACACCCTTTTCAAAGCGAACAGATAGGTTTTCAGTGAAATTTAGCATCAACACTCTCCCTAGTGTAGAGAATAGGAAGCAGGAACCTCATCACGAGTATACCGAGAATGATGAAGATGATGTTGTCAGAAGAGTTCCACAACGTGAAAGGTGTTCATTGGTCATTCATGGATCAGGACTCAAACCGTGTTGTAAATTCATGTATGATAGAATGGAGGATAGGCTTAATGCAATAGAAAACCGAATTAGAAAACATACAAGGGCATTTGTAGCTTCTGGTCTCTATGAAGAACCAACAGACCCCACATCTGCTTCACAGGTAAATATAATACTTCCCTTTCTGTCCCATGCACACTGA 777 0.3912 MEEEIKSEFKSSGFDIEDEQEILRKCVTFCTNYSFTPSLVVFDRQLNEPVVESAEIDGFLLQLQNEKKEDSVKEREEGGLHMYSIGDVEMHLNNDDDTKDDTPGTPINHHHDLLSPSTDPISLMYENVLSSGKASKSKLITPFSKRTDRFSVKFSINTLPSVENRKQEPHHEYTENDEDDVVRRVPQRERCSLVIHGSGLKPCCKFMYDRMEDRLNAIENRIRKHTRAFVASGLYEEPTDPTSASQVNIILPFLSHAH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6093g00001 258 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 250 IPR016722 -
Vium6093g00001 258 Coils Coil 208 228 - -
Vium6093g00001 258 MobiDBLite consensus disorder prediction 93 107 - -
Vium6093g00001 258 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6093g00001 Vium-Chr6093 54 5568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6093g00001 2 250 Core DNA Replication Machinery Family AT1G67630 44.141 2.98e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6093g00001 K02321 - gmx:100795306 360.533