Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6085g00004 ATGTCTCCTGAGGCATTGGATTTACTAGAGAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTGTGTCACCCATACCTTTCATCACTTCATGACATCAATGATGAACCAGTTGGTCCTAGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCAGTGAAATTCAATCCAGATCCACCCAGTCATTAA 243 0.4198 MSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPRQFNFDFEQPTCTEEHIKELIWRESVKFNPDPPSH 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6085g00004 80 ProSiteProfiles Protein kinase domain profile. 1 32 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium6085g00004 80 SUPERFAMILY Protein kinase-like (PK-like) 2 75 IPR011009 -
Vium6085g00004 80 Gene3D Phosphorylase Kinase; domain 1 47 70 - -
Vium6085g00004 80 Gene3D Transferase(Phosphotransferase) domain 1 2 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6085g00004 Vium-Chr6085 18298 19071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6085g00004 1 75 MAP Kinase Gene Family AT4G01370 78.667 2.91e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6085g00004 - - vum:124842375 174.096